| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma18g07480.1 |
| Family | GT35 |
| Protein Properties | Length: 847 Molecular Weight: 95979.1 Isoelectric Point: 6.3487 |
| Chromosome | Chromosome/Scaffold: 18 Start: 6182368 End: 6191008 |
| Description | alpha-glucan phosphorylase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT35 | 121 | 841 | 0 |
| ALCKFGLELEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPSWGYGLRYRYGLFKQRITREGQEEVAEDWLEKFSPWEVVRHDILYPIRFFGHVEVNP NGSRKWVGGEVVQALAYDVPIPGYQTKNTISLRLWEAKASAEDFNLFLFNDGQHDAASGLHSRAQQICAVLYPGDTTEGGKLLRLKQQFFLCSASLQDII SRFKERRQGPWNWSEFPTKVAVQLNDTHPTLAIPELMRLLMDDEGLGWDEAWDVISKTIAYTNHTVLPEALEKWSQPVMWKLLPRHMEIIQEIDKRFTAM INTTRLDLESELSSMRILDDNPQKPVVQMANLCVVSSHAVNGVAQLHSDILKSELFANYVSIWPTKFQNKTNGITPRRWLQFCNPELSGIITKWLKTDKW VTNLDLLTGLRQFADNEDLQAEWLSAKMASKQRLARYVLQVTGESIDPDSLFDIQVKRIHEYKRQLLNILGVIYRYKKLKEMSPEERKKTTPRTVMIGGK AFATYTNAIRIVRLVNDVGAVVNSDPEVNSYLKVVFVPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIREEISEENF FLFGATAEDVPRLRKERENGLFKPDPRFEEAKKFIRSGVFGSYDYNPLLESLEGNSGYGRGDYFLVGHDFPSYMDTQAKVDEVYRDRKKWLKMSILSTAG SGKFSSDRTIAQYAKEIWNIE | |||
| Full Sequence |
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| Protein Sequence Length: 847 Download |
| MAAKVEANGG GGKSDVSAVS AKVPAVAHPL AEKPDEVASN ISYHAQFSPH FSPFKFELEQ 60 AYYATAESVR DRLIRQWNET YLHFHKVDPK QTYYLSMEFL QGRALTNAIG NLNIHDTYTN 120 ALCKFGLELE EIAEQEKDAA LGNGGLGRLA SCFLDSMATL NLPSWGYGLR YRYGLFKQRI 180 TREGQEEVAE DWLEKFSPWE VVRHDILYPI RFFGHVEVNP NGSRKWVGGE VVQALAYDVP 240 IPGYQTKNTI SLRLWEAKAS AEDFNLFLFN DGQHDAASGL HSRAQQICAV LYPGDTTEGG 300 KLLRLKQQFF LCSASLQDII SRFKERRQGP WNWSEFPTKV AVQLNDTHPT LAIPELMRLL 360 MDDEGLGWDE AWDVISKTIA YTNHTVLPEA LEKWSQPVMW KLLPRHMEII QEIDKRFTAM 420 INTTRLDLES ELSSMRILDD NPQKPVVQMA NLCVVSSHAV NGVAQLHSDI LKSELFANYV 480 SIWPTKFQNK TNGITPRRWL QFCNPELSGI ITKWLKTDKW VTNLDLLTGL RQFADNEDLQ 540 AEWLSAKMAS KQRLARYVLQ VTGESIDPDS LFDIQVKRIH EYKRQLLNIL GVIYRYKKLK 600 EMSPEERKKT TPRTVMIGGK AFATYTNAIR IVRLVNDVGA VVNSDPEVNS YLKVVFVPNY 660 NVSVAEVLIP GSELSQHIST AGMEASGTSN MKFSLNGCLI IGTLDGANVE IREEISEENF 720 FLFGATAEDV PRLRKERENG LFKPDPRFEE AKKFIRSGVF GSYDYNPLLE SLEGNSGYGR 780 GDYFLVGHDF PSYMDTQAKV DEVYRDRKKW LKMSILSTAG SGKFSSDRTI AQYAKEIWNI 840 EECRVP* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 38 | 840 | 811 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| TIGR02093 | P_ylase | 0 | 41 | 840 | 808 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00343 | Phosphorylase | 0 | 121 | 842 | 727 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| PRK14986 | PRK14986 | 0 | 64 | 845 | 787 | + glycogen phosphorylase; Provisional | ||
| COG0058 | GlgP | 0 | 33 | 841 | 813 | + Glucan phosphorylase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004645 | phosphorylase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAG31926.1 | 0 | 3 | 846 | 2 | 843 | alpha-1,4-glucan phosphorylase H isozyme [Cucurbita maxima] |
| Swiss-Prot | P53537 | 0 | 1 | 846 | 1 | 842 | PHSH_VICFA RecName: Full=Alpha-glucan phosphorylase, H isozyme; AltName: Full=Starch phosphorylase H |
| RefSeq | XP_002280732.1 | 0 | 1 | 846 | 1 | 843 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313399.1 | 0 | 3 | 846 | 4 | 853 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520435.1 | 0 | 5 | 846 | 6 | 849 | glycogen phosphorylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1z8d_A | 0 | 62 | 844 | 53 | 832 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 1ygp_B | 0 | 61 | 841 | 68 | 876 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| PDB | 1ygp_A | 0 | 61 | 841 | 68 | 876 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| PDB | 3l7d_A | 0 | 62 | 844 | 53 | 832 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| PDB | 3l7c_A | 0 | 62 | 844 | 53 | 832 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1826 | EC-2.4.1.1 | phosphorylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO782200 | 410 | 177 | 586 | 0 |
| HO418036 | 540 | 247 | 762 | 0 |
| HO801570 | 344 | 1 | 344 | 0 |
| HO780010 | 311 | 537 | 847 | 0 |
| HO780010 | 37 | 493 | 529 | 0.00000000000002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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