| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma18g28130.1 |
| Family | GT1 |
| Protein Properties | Length: 594 Molecular Weight: 65312.9 Isoelectric Point: 6.6783 |
| Chromosome | Chromosome/Scaffold: 18 Start: 32078874 End: 32106448 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 162 | 563 | 0 |
| DVQPFIAIGKRMQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPIQRNQMKEIINSLLPACKEPDIDSGVPFKADAI IANPPAYGHTHVAEALKIPIHIFFTMPWTPTTEFPHPLSRVKQQAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVTYLSGSQGSETDVPHAYIWSP HLVPKPKDWGPKIDVVGFCFLDLALNYEPPESLVKWLEEGDKPIYIGFGSLPVQEPKKMTQIIVDALEITGQRGIINKGWGGLGNLAEPKDSIYLLDNCP HDWLFLRCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLVDAIKLMLDPKVKERAIELAKAMENEDGVTGAVK AF | |||
| Full Sequence |
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| Protein Sequence Length: 594 Download |
| MADSPEDCSR DPGNGKDMED STSSVANGTS SSSASGILGK GLSKVTTLPA DISQDKSESS 60 SSKFKMERSK TERQRHLSPE DAAQIFDDKI PIQEKLKLLN RIATVKDDGT VEFEVPVDVE 120 PEAIFARSKQ VNHVVDDSLD ATDFHYIPPL NIVMLIVGTR GDVQPFIAIG KRMQDYGHRV 180 RLATHSNFKE FVLTAGLEFY PLGGDPKVLA GYMVKNKGFL PSGPSEIPIQ RNQMKEIINS 240 LLPACKEPDI DSGVPFKADA IIANPPAYGH THVAEALKIP IHIFFTMPWT PTTEFPHPLS 300 RVKQQAGYRL SYQIVDSLIW LGIRDMINDL RKKKLKLRPV TYLSGSQGSE TDVPHAYIWS 360 PHLVPKPKDW GPKIDVVGFC FLDLALNYEP PESLVKWLEE GDKPIYIGFG SLPVQEPKKM 420 TQIIVDALEI TGQRGIINKG WGGLGNLAEP KDSIYLLDNC PHDWLFLRCK AVVHHGGAGT 480 TAAGLKAACP TTIVPFFGDQ PFWGERVHAR GVGPPPIPVD EFSLPKLVDA IKLMLDPKVK 540 ERAIELAKAM ENEDGVTGAV KAFFKQLPQK KSESDADPQP TGFFSVRRCF GCS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 5.0e-32 | 152 | 574 | 434 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 4.0e-35 | 152 | 296 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 2.0e-118 | 151 | 563 | 413 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC22616.1 | 0 | 40 | 593 | 53 | 609 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| DDBJ | BAC22617.1 | 0 | 6 | 593 | 15 | 602 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| EMBL | CBI37267.1 | 0 | 13 | 593 | 29 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265023.1 | 0 | 13 | 593 | 76 | 662 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002521125.1 | 0 | 14 | 593 | 36 | 626 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 9e-33 | 150 | 572 | 1 | 386 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 3h4i_A | 9e-33 | 150 | 572 | 1 | 386 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1iir_A | 9e-21 | 394 | 571 | 230 | 402 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 1rrv_B | 9e-21 | 150 | 555 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 159 | 493 | 0 |
| GO883166 | 311 | 135 | 445 | 0 |
| CX664063 | 295 | 249 | 543 | 0 |
| DV466557 | 287 | 269 | 555 | 0 |
| GT046352 | 32 | 486 | 517 | 0.0008 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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