| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma18g28130.2 |
| Family | GT1 |
| Protein Properties | Length: 508 Molecular Weight: 56401.3 Isoelectric Point: 7.8747 |
| Chromosome | Chromosome/Scaffold: 18 Start: 32078874 End: 32106448 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 76 | 477 | 0 |
| DVQPFIAIGKRMQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPIQRNQMKEIINSLLPACKEPDIDSGVPFKADAI IANPPAYGHTHVAEALKIPIHIFFTMPWTPTTEFPHPLSRVKQQAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVTYLSGSQGSETDVPHAYIWSP HLVPKPKDWGPKIDVVGFCFLDLALNYEPPESLVKWLEEGDKPIYIGFGSLPVQEPKKMTQIIVDALEITGQRGIINKGWGGLGNLAEPKDSIYLLDNCP HDWLFLRCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLVDAIKLMLDPKVKERAIELAKAMENEDGVTGAVK AF | |||
| Full Sequence |
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| Protein Sequence Length: 508 Download |
| MQHRFLTTKF LSRRRIATVK DDGTVEFEVP VDVEPEAIFA RSKQVNHVVD DSLDATDFHY 60 IPPLNIVMLI VGTRGDVQPF IAIGKRMQDY GHRVRLATHS NFKEFVLTAG LEFYPLGGDP 120 KVLAGYMVKN KGFLPSGPSE IPIQRNQMKE IINSLLPACK EPDIDSGVPF KADAIIANPP 180 AYGHTHVAEA LKIPIHIFFT MPWTPTTEFP HPLSRVKQQA GYRLSYQIVD SLIWLGIRDM 240 INDLRKKKLK LRPVTYLSGS QGSETDVPHA YIWSPHLVPK PKDWGPKIDV VGFCFLDLAL 300 NYEPPESLVK WLEEGDKPIY IGFGSLPVQE PKKMTQIIVD ALEITGQRGI INKGWGGLGN 360 LAEPKDSIYL LDNCPHDWLF LRCKAVVHHG GAGTTAAGLK AACPTTIVPF FGDQPFWGER 420 VHARGVGPPP IPVDEFSLPK LVDAIKLMLD PKVKERAIEL AKAMENEDGV TGAVKAFFKQ 480 LPQKKSESDA DPQPTGFFSV RRCFGCS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 3.0e-32 | 66 | 488 | 434 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 4.0e-35 | 66 | 210 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 6.0e-119 | 65 | 477 | 413 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC22617.1 | 0 | 14 | 507 | 109 | 602 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| EMBL | CBI37267.1 | 0 | 14 | 507 | 120 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265023.1 | 0 | 14 | 507 | 167 | 662 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301763.1 | 0 | 14 | 505 | 40 | 535 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002521125.1 | 0 | 14 | 507 | 129 | 626 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 4e-33 | 64 | 487 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 3h4i_A | 4e-33 | 64 | 487 | 1 | 387 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 4e-21 | 64 | 469 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 4e-21 | 64 | 469 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1iir_A | 9e-21 | 308 | 485 | 230 | 402 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 73 | 407 | 0 |
| GO883166 | 312 | 48 | 359 | 0 |
| CX664063 | 295 | 163 | 457 | 0 |
| DV466557 | 287 | 183 | 469 | 0 |
| GT046352 | 26 | 400 | 425 | 0.0007 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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