| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma18g32840.1 |
| Family | CBM43 |
| Protein Properties | Length: 468 Molecular Weight: 51703.5 Isoelectric Point: 9.8448 |
| Chromosome | Chromosome/Scaffold: 18 Start: 38273414 End: 38276451 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 378 | 461 | 2e-27 |
| WCVAARRDNATALTAALAYACSQGNGTCDPIQSKGKCFKPDSVFWHASYAFSAYWAQFRKVGGTCYFNGLATQTAKDPSYGSCK | |||
| GH17 | 30 | 351 | 0 |
| GICYGQLGDNLPPPRESVSLITSVHAKRVKLYDANPSILHALQDTRLQVSIMVPNDLILNISTNQTLSDQWVSDNVVPYHPRTLIRYLLVGNEVTSTTAA TATWPHLVPAMRRIKRSLKSHGIRKIKVGTSSAMDVLQTSFPPSNGAFRKDLTAPVMKPMLKFLNRTKSFFFLDVYPFFTWSADPLNINLDYALFESKTV TVKDPVSGLVYTNLFDQMVDAVYFAMKRLGFPGVRIFIAETGWPNGGDLDQIGANTYNAATYNRNFIKKVTKKPRVGTPARPGSALPSFLFALFNENQKP GPSTERHFGLLHPNGSRVYDVD | |||
| Full Sequence |
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| Protein Sequence Length: 468 Download |
| MAMLLLIPLF LSSILLFPIS SATTFSPQPG ICYGQLGDNL PPPRESVSLI TSVHAKRVKL 60 YDANPSILHA LQDTRLQVSI MVPNDLILNI STNQTLSDQW VSDNVVPYHP RTLIRYLLVG 120 NEVTSTTAAT ATWPHLVPAM RRIKRSLKSH GIRKIKVGTS SAMDVLQTSF PPSNGAFRKD 180 LTAPVMKPML KFLNRTKSFF FLDVYPFFTW SADPLNINLD YALFESKTVT VKDPVSGLVY 240 TNLFDQMVDA VYFAMKRLGF PGVRIFIAET GWPNGGDLDQ IGANTYNAAT YNRNFIKKVT 300 KKPRVGTPAR PGSALPSFLF ALFNENQKPG PSTERHFGLL HPNGSRVYDV DLSGETPEAE 360 FRPLPVPENN EKFKGRIWCV AARRDNATAL TAALAYACSQ GNGTCDPIQS KGKCFKPDSV 420 FWHASYAFSA YWAQFRKVGG TCYFNGLATQ TAKDPSYGSC KFPSVTL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03198 | Glyco_hydro_72 | 0.003 | 120 | 165 | 46 | + Glucanosyltransferase. This is a family of glycosylphosphatidylinositol-anchored beta(1-3)glucanosyltransferases. The active site residues in the Aspergillus fumigatus example are the two glutamate residues at 160 and 261. | ||
| pfam07983 | X8 | 2.0e-11 | 378 | 449 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-28 | 378 | 462 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-109 | 30 | 351 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65039.1 | 0 | 21 | 467 | 17 | 460 | putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 9 | 467 | 11 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_683538.1 | 0 | 21 | 467 | 17 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002303070.1 | 0 | 15 | 467 | 10 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 1 | 467 | 1 | 465 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 30 | 352 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 30 | 353 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 30 | 353 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 30 | 353 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 30 | 353 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
