| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma18g47490.1 |
| Family | GT1 |
| Protein Properties | Length: 564 Molecular Weight: 62614.1 Isoelectric Point: 8.828 |
| Chromosome | Chromosome/Scaffold: 18 Start: 57119209 End: 57127876 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT1 | 116 | 523 | 0 |
| LIVGTRGDVQPFVAMGKRLQEDGHRVRLATHKNFEDFVMNAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIHTQRNQIKDIINTLLKACNSRYPESNA PFKAEAIIANPPAYGHTHVAEYLKVPLHIFFTMPWTPTSEFPHPLSRVKQPIGYRLSYQIVDALIWLGIRDLINEFRKKELKLKPITYLSGSYTHPFDVP HGYIWSPHLVPKPKDWGPKIDVVGFCFLDLASNYVPPKSLVDWLEEGEKPIYVGFGSLPLQQPEKMTQIIIHALEETGQRGVINKGWGGLGSLAEQNKSV YLLDNCPHDWLFPRCTAVVHHGGAGTTAAGLRAECPTTIVPFFGDQPFWGDRVRARGVGPAPIPVDEFSFDRLVDAIHFMLKPEVKKRAVELANAMKNEN GVLGAVKA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 564 Download |
| MLSLSPSRNA EAAPVAQPAD QVNGKNAAVA KVDRSKGSSA LALAKFLDEK VPFKKKMRWI 60 KRASILKDDG TVEIKVSGEG SNIEHDVKCD ESHDEFCDAI HSQDIQPIEP LQIVMLIVGT 120 RGDVQPFVAM GKRLQEDGHR VRLATHKNFE DFVMNAGLEF YPLGGDPKVL AGYMVKNKGF 180 LPSGPSEIHT QRNQIKDIIN TLLKACNSRY PESNAPFKAE AIIANPPAYG HTHVAEYLKV 240 PLHIFFTMPW TPTSEFPHPL SRVKQPIGYR LSYQIVDALI WLGIRDLINE FRKKELKLKP 300 ITYLSGSYTH PFDVPHGYIW SPHLVPKPKD WGPKIDVVGF CFLDLASNYV PPKSLVDWLE 360 EGEKPIYVGF GSLPLQQPEK MTQIIIHALE ETGQRGVINK GWGGLGSLAE QNKSVYLLDN 420 CPHDWLFPRC TAVVHHGGAG TTAAGLRAEC PTTIVPFFGD QPFWGDRVRA RGVGPAPIPV 480 DEFSFDRLVD AIHFMLKPEV KKRAVELANA MKNENGVLGA VKAFYKHYPA EFKRLASTAE 540 PKSVHKYFSI RGCFGCSKSS GYK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 3.0e-29 | 113 | 517 | 410 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 7.0e-31 | 113 | 257 | 149 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 6.0e-122 | 113 | 527 | 419 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN05866.1 | 0 | 52 | 561 | 3 | 517 | Glycosyl transferase, family 28 [Medicago truncatula] |
| EMBL | CBI37267.1 | 0 | 21 | 557 | 80 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265023.1 | 0 | 21 | 557 | 127 | 662 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002512608.1 | 0 | 44 | 558 | 82 | 597 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| RefSeq | XP_002521125.1 | 0 | 31 | 557 | 93 | 626 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 1e-31 | 111 | 520 | 1 | 374 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 3h4i_A | 1e-31 | 111 | 520 | 1 | 374 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1iir_A | 7e-27 | 111 | 520 | 1 | 391 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 1rrv_B | 1e-23 | 111 | 515 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 1e-23 | 111 | 515 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 120 | 454 | 0 |
| GO883166 | 334 | 86 | 417 | 0 |
| HO626576 | 426 | 111 | 532 | 0 |
| CX664063 | 293 | 212 | 504 | 0 |
| GT046352 | 32 | 447 | 478 | 0.002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
