Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma18g49480.1 |
Family | GT5 |
Protein Properties | Length: 425 Molecular Weight: 48209.2 Isoelectric Point: 5.1805 |
Chromosome | Chromosome/Scaffold: 18 Start: 58893259 End: 58895744 |
Description | starch synthase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 148 | 416 | 0 |
NDWHTALLPVYLKAYYRDQGLMQYARSVLVIHNIAHQGRGPVDDFFFVDLPEHHKDLFKFHIGGDHFNIFAAGLKTADRVVTVSHGYAWELKTSEGGWGL HGIINENDWKLGHYGYTNYSLETLSSGKAKCKAALQKELGLPIHEDVPKGIDLIAKAIPWLMSQDVQLKTCLGNFKSNTMTRITAGADILLMPSRFEPCG LNQLYAMNYGTVPVVHAVGGLRDTVQPFDPFNESGLGWTFDRNCLWTYRERGMTQDLSWDNAAQQYEEV |
Full Sequence |
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Protein Sequence Length: 425 Download |
MWDWSSKSQQ EPVMIADNHE EDDERLSDPT PDEPESSKRP RRNPQLPARL QDCVMFNDNN 60 PSDEEIINFA LFAGYGPITF EEALSYKNWR KAMDDEIHAI GELNVKLPQN EDKRTKTKES 120 SYRDGNVPWH VPCGGVCYGD GNLAFIENDW HTALLPVYLK AYYRDQGLMQ YARSVLVIHN 180 IAHQGRGPVD DFFFVDLPEH HKDLFKFHIG GDHFNIFAAG LKTADRVVTV SHGYAWELKT 240 SEGGWGLHGI INENDWKLGH YGYTNYSLET LSSGKAKCKA ALQKELGLPI HEDVPKGIDL 300 IAKAIPWLMS QDVQLKTCLG NFKSNTMTRI TAGADILLMP SRFEPCGLNQ LYAMNYGTVP 360 VVHAVGGLRD TVQPFDPFNE SGLGWTFDRN CLWTYRERGM TQDLSWDNAA QQYEEVLLAA 420 KYQW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 8.0e-44 | 149 | 421 | 352 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 2.0e-66 | 148 | 415 | 343 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 1.0e-88 | 148 | 416 | 344 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 3.0e-100 | 148 | 417 | 346 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 1.0e-104 | 148 | 420 | 345 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV25894.1 | 0 | 127 | 424 | 376 | 751 | starch synthase isoform II [Manihot esculenta] |
GenBank | ACL98481.1 | 0 | 127 | 424 | 417 | 792 | starch synthase IIa precursor [Lotus japonicus] |
GenBank | ACL98484.1 | 0 | 127 | 424 | 323 | 698 | starch synthase IIb precursor [Vigna unguiculata] |
GenBank | ACL98486.1 | 0 | 127 | 424 | 345 | 720 | starch synthase IIb precursor [Vigna radiata] |
DDBJ | BAD18846.1 | 0 | 127 | 424 | 349 | 724 | starch synthase II precursor [Phaseolus vulgaris] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 4e-38 | 138 | 418 | 151 | 509 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
PDB | 3vue_A | 4e-38 | 138 | 418 | 151 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3guh_A | 1e-30 | 148 | 416 | 136 | 472 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 2r4u_A | 1e-30 | 148 | 416 | 136 | 472 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 2r4t_A | 1e-30 | 148 | 416 | 136 | 472 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO781048 | 378 | 127 | 425 | 0 |
HO777841 | 320 | 185 | 425 | 0 |
HO777841 | 66 | 127 | 192 | 0 |
HO445868 | 376 | 129 | 425 | 0 |
HO390058 | 377 | 128 | 425 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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