| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma19g02690.1 |
| Family | GT5 |
| Protein Properties | Length: 775 Molecular Weight: 86574 Isoelectric Point: 6.2211 |
| Chromosome | Chromosome/Scaffold: 19 Start: 2570331 End: 2578494 |
| Description | starch synthase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 284 | 767 | 0 |
| NVILVAAECAPFVKTGGLGDVVGSLPKALARRGHRVMVVVPRYSHYAEAQDLGVRKRYKVDGQDMEVTYFHSYIDGVDFVFIDSPNFRHLQDNIYRGSRE DILKRMVLFCKAAAEVPWHVPCGGVCYGDGNLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIHNIAHQGRGPVDDFRYTDLPEHYIDLFKLYDPV GGEHFNIFAAGLKAADRIVTVSHGYAWEIKTSEGGWGLHGIIYENDWKLRGIVNGIDTKDWNPKFDVHLKSDGYTNYTLETLQSGKRRCKAALQKELGFP VREDVPLLGFIGRLDQQKGIDLIAESIPWIVSQDVQLVMLGTGRPDLEDMLRQFESQHRDKVRGWVGFSVKMAHRITAGADILLMPSRFEPCGLNQLYAM NYGTIPVVHAVGGLRDTVKPFNPFEESGLGWTFDSAETNKLINAIGNCLLTFRQYKQSWEGLQRRGMTQDLSWDNAAQQYEEVL | |||
| Full Sequence |
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| Protein Sequence Length: 775 Download |
| MASMGSLPFL VEANADSTVM MMMLHNRNHK FSSSKFSTLN ASSLVRGWGR GRVKHRCSRG 60 LLCLVEKNKH ISALGKSSGT SEDKDDSDEV LQATIEKSKK VLALQRELLQ QISERKKLVS 120 SINSETTPEI GDSISYEHSD KSLSSDSNPQ KGSARRGSAF ENENGGVVSS NYVESIEKEI 180 PDVSFVGIDL GLDKSEEEDD NLSPVEKASP RLYVDEQLNS KRYEIIKPDT LPSDIPCSTE 240 TFSRKIEILE ALSESSTKEV ANEADNVEGE GEKPPPLAGA NVMNVILVAA ECAPFVKTGG 300 LGDVVGSLPK ALARRGHRVM VVVPRYSHYA EAQDLGVRKR YKVDGQDMEV TYFHSYIDGV 360 DFVFIDSPNF RHLQDNIYRG SREDILKRMV LFCKAAAEVP WHVPCGGVCY GDGNLAFIAN 420 DWHTALLPVY LKAYYRDHGI MKYTRSVLVI HNIAHQGRGP VDDFRYTDLP EHYIDLFKLY 480 DPVGGEHFNI FAAGLKAADR IVTVSHGYAW EIKTSEGGWG LHGIIYENDW KLRGIVNGID 540 TKDWNPKFDV HLKSDGYTNY TLETLQSGKR RCKAALQKEL GFPVREDVPL LGFIGRLDQQ 600 KGIDLIAESI PWIVSQDVQL VMLGTGRPDL EDMLRQFESQ HRDKVRGWVG FSVKMAHRIT 660 AGADILLMPS RFEPCGLNQL YAMNYGTIPV VHAVGGLRDT VKPFNPFEES GLGWTFDSAE 720 TNKLINAIGN CLLTFRQYKQ SWEGLQRRGM TQDLSWDNAA QQYEEVLVAA KYQW* 780 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PRK14099 | PRK14099 | 9.0e-93 | 283 | 771 | 522 | + glycogen synthase; Provisional |
| COG0297 | GlgA | 9.0e-145 | 283 | 765 | 507 | + Glycogen synthase [Carbohydrate transport and metabolism] |
| PRK00654 | glgA | 2.0e-178 | 283 | 766 | 498 | + glycogen synthase; Provisional |
| TIGR02095 | glgA | 0 | 283 | 770 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 284 | 767 | 496 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL98479.1 | 0 | 20 | 774 | 1 | 757 | starch synthase IIa-1 precursor [Glycine max] |
| GenBank | ACL98480.1 | 0 | 1 | 774 | 1 | 774 | starch synthase IIa-2 precursor [Glycine max] |
| GenBank | ACL98481.1 | 0 | 1 | 774 | 1 | 792 | starch synthase IIa precursor [Lotus japonicus] |
| GenBank | ACL98485.1 | 0 | 20 | 774 | 1 | 742 | starch synthase IIa precursor [Vigna radiata] |
| DDBJ | BAD18847.1 | 0 | 20 | 774 | 1 | 738 | starch synthase II-2 precursor [Phaseolus vulgaris] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 283 | 768 | 10 | 509 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 3vue_A | 0 | 283 | 768 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 283 | 766 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 283 | 766 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 283 | 766 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777841 | 319 | 457 | 775 | 0 |
| HO777841 | 393 | 75 | 464 | 0 |
| HO781048 | 392 | 384 | 775 | 0 |
| HO445868 | 438 | 338 | 775 | 0 |
| HO781048 | 41 | 342 | 382 | 0.001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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