Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma19g03050.2 |
Family | CE8 |
Protein Properties | Length: 298 Molecular Weight: 33595.1 Isoelectric Point: 7.2074 |
Chromosome | Chromosome/Scaffold: 19 Start: 3166011 End: 3175063 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 6 | 277 | 0 |
ITVSQDGTEQCRTVQEAIDAVPLGNTRRTVILTKNFITLIGLRPEDTLLTWNNTATLIHHHQDAKVIGTGIFGCGTIIVEGGDFIAENITFENSSPQGAG QAVAVRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKTAQSRNSPQEKTGYVFLRYVVTGNGGTSYAYLGRPWR PFARVVFAFTYMDQCIKPAGWNNWGKIEKEKTVSFYEYRCFGPGFSPSQRVKWARELQAEADEHFLMHSFID |
Full Sequence |
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Protein Sequence Length: 298 Download |
MAAFVITVSQ DGTEQCRTVQ EAIDAVPLGN TRRTVILTKN FITLIGLRPE DTLLTWNNTA 60 TLIHHHQDAK VIGTGIFGCG TIIVEGGDFI AENITFENSS PQGAGQAVAV RVTADRCAFY 120 NCRFLGWQDT LYLHYGKQYL KDCYIEGSVD FIFGNSTALL EHCHIHCKTA QSRNSPQEKT 180 GYVFLRYVVT GNGGTSYAYL GRPWRPFARV VFAFTYMDQC IKPAGWNNWG KIEKEKTVSF 240 YEYRCFGPGF SPSQRVKWAR ELQAEADEHF LMHSFIDPES ERPWLAQRMV LNIPYSA* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 2.0e-75 | 6 | 259 | 284 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 2.0e-79 | 5 | 285 | 309 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 4.0e-82 | 1 | 285 | 306 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-88 | 18 | 277 | 286 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 1 | 297 | 316 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 1 | 297 | 1 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 5 | 297 | 6 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 1 | 297 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 1 | 297 | 1 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 1 | 297 | 1 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 6.02558e-44 | 6 | 258 | 9 | 281 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-38 | 8 | 290 | 7 | 298 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 8e-22 | 3 | 264 | 6 | 325 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 8e-22 | 3 | 264 | 6 | 325 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 8e-22 | 3 | 264 | 6 | 325 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY292729 | 314 | 1 | 294 | 0 |
GR994392 | 306 | 1 | 287 | 0 |
DY292725 | 301 | 1 | 282 | 0 |
ES797575 | 314 | 1 | 295 | 0 |
CX072668 | 258 | 44 | 296 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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