| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma19g28600.2 |
| Family | GH17 |
| Protein Properties | Length: 329 Molecular Weight: 36225.1 Isoelectric Point: 5.0345 |
| Chromosome | Chromosome/Scaffold: 19 Start: 36187569 End: 36189044 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH17 | 16 | 216 | 0 |
| RYVAVGNKPFLKSYNNSFLNITFPPLHKIQNALNEAGLGDKIKVIVSLNADVNQSPENNHVPSAGIFRPYISVNGVPFTMNIYPFLSLYGNDDFPFNYAF FDGVDNPENDNVGFGDLPILVGEVGWPTEGDKNANTGNALRFYNGLLPRLAANRGTPRRPGYIEVYLFGFIDEDAKSIAPGNLERHWGTFRYDGQPKFPM D | |||
| Full Sequence |
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| Protein Sequence Length: 329 Download |
| MTLTLKEVLH YIFFCRYVAV GNKPFLKSYN NSFLNITFPP LHKIQNALNE AGLGDKIKVI 60 VSLNADVNQS PENNHVPSAG IFRPYISVNG VPFTMNIYPF LSLYGNDDFP FNYAFFDGVD 120 NPENDNVGFG DLPILVGEVG WPTEGDKNAN TGNALRFYNG LLPRLAANRG TPRRPGYIEV 180 YLFGFIDEDA KSIAPGNLER HWGTFRYDGQ PKFPMDLSGQ NQNKFLVGTQ NITLTMLAPL 240 DCTALGYGCS CNNLDLNGNA SYAFNMYFQV QNQNPMGCDF QGLSKLTTDN ISTPTGNFIV 300 QIVSSSGSSL MPSLAATLFV SLFMILFS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-5 | 130 | 208 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-8 | 241 | 283 | 52 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-17 | 241 | 298 | 59 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-32 | 16 | 216 | 236 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN09816.1 | 0 | 16 | 307 | 113 | 459 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
| RefSeq | NP_179534.1 | 0 | 17 | 309 | 109 | 455 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277003.1 | 0 | 16 | 302 | 112 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319699.1 | 0 | 16 | 304 | 110 | 455 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525445.1 | 0 | 16 | 313 | 110 | 464 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 2e-20 | 16 | 218 | 88 | 315 | A Chain A, Solution Structure Of The Enzyme I Dimer Using Residual Dipolar Couplings And Small Angle X-Ray Scattering |
| PDB | 3ur8_A | 2e-20 | 16 | 218 | 88 | 315 | A Chain A, Solution Structure Of The Enzyme I Dimer Using Residual Dipolar Couplings And Small Angle X-Ray Scattering |
| PDB | 3ur7_B | 2e-20 | 16 | 218 | 88 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 2e-20 | 16 | 218 | 88 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 1e-19 | 16 | 218 | 88 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO792157 | 227 | 12 | 206 | 0 |
| HO792157 | 142 | 211 | 327 | 0 |
| CA993350 | 302 | 57 | 303 | 0 |
| GR410464 | 295 | 16 | 253 | 0 |
| HO792157 | 76 | 152 | 224 | 0.00000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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