| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma19g34960.1 |
| Family | AA3 |
| Protein Properties | Length: 745 Molecular Weight: 82227.9 Isoelectric Point: 7.9001 |
| Chromosome | Chromosome/Scaffold: 19 Start: 42557789 End: 42561603 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 215 | 741 | 0 |
| EKGLEVTEDKRQNLYKVKCDVVIVGSGCGGGVAAAVLANSGHKVVVLEKGEYFVSHDYSSLEGPSMDEQYESGGIMPSLDGKMMILAGSTVGGGSAVNWS ASIRTPDSVLREWSKKYKIPLFGSSDYQSAMDSVCRRIGVTEKCKKESFQNQILIQGCEKMGLKVESVAINSSADHYCGSCCYGCRTGDKKGTDSTWLVD SVGNGAVILTGCKAERFILENGKNGMKKKKCLGVIAAASWRSKVTKKLQIESKVTISACGSLNTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEDMTT NFSGNNYEGGIITSIHKEYAEDSTPRFIIETPSLGPGSFSAFVPWLSGQDMKDRMAKYARTANIFALIRDQGSGEVKAEGRVTYRLDKEDKESLRVGLRK ALRILVAAGAMEVGTYRSDGQRIKCKGMKEEDLEEFLDTVTIVGGPRSRNEVWTVFTTAHQMSSCRMGASEEEGALDENGETWEAEGLYVCDGSVLPSAV GVNPMVTIQSTSYCIASKIAESLGKAS | |||
| Full Sequence |
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| Protein Sequence Length: 745 Download |
| MEGRESCHPL LRGGRRREEK GYNHGLSTTQ MHVMAAICDA LIPSLPLNKD TSQDQALSDF 60 YNTSASQLPF PDEAAELLYK RTVPEAVSLV SWVLWILSFR LGTLLLCGRL SLDWKWPFIR 120 KFSEISLEKR EQIFRNWTRE KSWVALRVVF VLIKLFCFYN FFSRTDANGQ NPTWKAIGYQ 180 VDTKEKLIRK ERPLEKGLIE TMYETDSTLI QSLTEKGLEV TEDKRQNLYK VKCDVVIVGS 240 GCGGGVAAAV LANSGHKVVV LEKGEYFVSH DYSSLEGPSM DEQYESGGIM PSLDGKMMIL 300 AGSTVGGGSA VNWSASIRTP DSVLREWSKK YKIPLFGSSD YQSAMDSVCR RIGVTEKCKK 360 ESFQNQILIQ GCEKMGLKVE SVAINSSADH YCGSCCYGCR TGDKKGTDST WLVDSVGNGA 420 VILTGCKAER FILENGKNGM KKKKCLGVIA AASWRSKVTK KLQIESKVTI SACGSLNTPP 480 LMISSGLKNP NIGRNLHLHP VQFAWGYFPE DMTTNFSGNN YEGGIITSIH KEYAEDSTPR 540 FIIETPSLGP GSFSAFVPWL SGQDMKDRMA KYARTANIFA LIRDQGSGEV KAEGRVTYRL 600 DKEDKESLRV GLRKALRILV AAGAMEVGTY RSDGQRIKCK GMKEEDLEEF LDTVTIVGGP 660 RSRNEVWTVF TTAHQMSSCR MGASEEEGAL DENGETWEAE GLYVCDGSVL PSAVGVNPMV 720 TIQSTSYCIA SKIAESLGKA STYS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.0005 | 587 | 738 | 158 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 8.0e-22 | 595 | 723 | 129 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 3.0e-26 | 253 | 735 | 545 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 2.0e-88 | 280 | 501 | 225 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22878.1 | 0 | 22 | 744 | 1 | 723 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 4 | 739 | 2 | 737 | hypothetical protein [Vitis vinifera] |
| EMBL | CAP15763.1 | 0 | 1 | 739 | 1 | 748 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
| RefSeq | XP_002285334.1 | 0 | 4 | 739 | 2 | 737 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002529832.1 | 0 | 1 | 739 | 1 | 743 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jbv_B | 0.0000008 | 422 | 722 | 226 | 515 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| PDB | 2jbv_A | 0.0000008 | 422 | 722 | 226 | 515 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| PDB | 3nne_H | 0.0000009 | 422 | 722 | 226 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.0000009 | 422 | 722 | 226 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_F | 0.0000009 | 422 | 722 | 226 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 745 | 2 | 738 | 0 |
| HO779224 | 448 | 204 | 650 | 0 |
| HO811216 | 326 | 415 | 737 | 0 |
| EL893058 | 290 | 408 | 697 | 0 |
| FF395397 | 256 | 475 | 728 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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