Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma19g37340.1 |
Family | GT47 |
Protein Properties | Length: 538 Molecular Weight: 60734 Isoelectric Point: 8.3424 |
Chromosome | Chromosome/Scaffold: 19 Start: 44524678 End: 44529714 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 205 | 486 | 0 |
EKQFKVFVYEEGEPPVFHNGPCKSIYSMEGNFIHAIEMNDQFRTRDPEEAHVFFLPFSVAMLVQFVYVRDSHDFGPIKKTVTDYVNVIGGRYPYWNRSLG ADHFYLACHDWGPETSRSIPNLNKNSIRVLCNANTSEGFKPSKDVSFPEINLQTGSINGFIGGPSASRRPLLAFFAGGLHGPIRPVLLEHWENKDEDIQV HKYLPKGVSYYEMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFNDVLNWKSFSVEVSVKDIPRLKEILLSI |
Full Sequence |
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Protein Sequence Length: 538 Download |
MGGVRWGRPE SSSSMKLFLL MVPLVLVAGL VSVLGPNPSS WLFSANAPVL YLEGSVTSSS 60 STSSGAVTVT NPSEVKQREG LVVVAVENRG GEKVISDDTD FNHSSTPPFS VQAIQTPQQP 120 NKDEQNVSQL WANVTGVNES YLPPERPKLQ RKFSILDRTE AGLRQARAAI REARNGNQTQ 180 DIDYVPVGPM YNNANAFHRS YLEMEKQFKV FVYEEGEPPV FHNGPCKSIY SMEGNFIHAI 240 EMNDQFRTRD PEEAHVFFLP FSVAMLVQFV YVRDSHDFGP IKKTVTDYVN VIGGRYPYWN 300 RSLGADHFYL ACHDWGPETS RSIPNLNKNS IRVLCNANTS EGFKPSKDVS FPEINLQTGS 360 INGFIGGPSA SRRPLLAFFA GGLHGPIRPV LLEHWENKDE DIQVHKYLPK GVSYYEMLRK 420 SKFCLCPSGY EVASPRVVEA IYTGCVPVLI SDHYVPPFND VLNWKSFSVE VSVKDIPRLK 480 EILLSISPRQ YIRMQRRVGQ VRRHFEVHSP PKRYDVFHMI LHSVWLRRLN FRVHDDQ* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-67 | 204 | 486 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08605.1 | 0 | 133 | 535 | 3 | 407 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_001031828.1 | 0 | 133 | 535 | 113 | 517 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002284018.1 | 0 | 204 | 534 | 1 | 331 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326234.1 | 0 | 204 | 530 | 1 | 327 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528630.1 | 0 | 40 | 537 | 61 | 569 | catalytic, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |