| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma19g39990.1 |
| Family | CE8 |
| Protein Properties | Length: 556 Molecular Weight: 60934 Isoelectric Point: 8.9234 |
| Chromosome | Chromosome/Scaffold: 19 Start: 46477661 End: 46480102 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 243 | 537 | 0 |
| VTVSQDGSGNFTTINDAIAAAPNKSVSTDGYFLIYVTAGVYEENVSVDKKKTYLMMVGDGINKTIITGNRSVVDGWTTFSSATLAVVGQGFVGVNMTIRN TAGAVKHQAVALRSGADLSTFYSCSFEGYQDTLYVHSLRQFYSECDIYGTVDFIFGNAKVVFQNCKMYPRLPMSGQFNAITAQGRTDPNQDTGISIHNCT IRAADDLAASNGVATYLGRPWKEYSRTVYMQTVMDSVIHAKGWREWDGDFALSTLYYAEYSNSGPGSGTDNRVTWPGYHVINATDAANFTVSNFL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 556 Download |
| MASKFCFFLF LILLPLFASS DTVPNPTTPV SPGTACKSTP DPSFCKSVLP PQNGNVYDYG 60 RFSVKKSLSQ ARKFLNLVDK YLQRSSSLSA TAIRALQDCR TLGELNFDFL SSSFQTVNKT 120 TRFLPSFQAD DIQTLLSAIL TNQQTCLDGL KDTASAWSVR NGLTVPLSND TKLYSVSLAL 180 FTKGWVPRTK AKAMHPTKKQ LGFKNGRLPL KMSSRTRAIY ESVSRRKLLQ ATVGDEVVVR 240 DIVTVSQDGS GNFTTINDAI AAAPNKSVST DGYFLIYVTA GVYEENVSVD KKKTYLMMVG 300 DGINKTIITG NRSVVDGWTT FSSATLAVVG QGFVGVNMTI RNTAGAVKHQ AVALRSGADL 360 STFYSCSFEG YQDTLYVHSL RQFYSECDIY GTVDFIFGNA KVVFQNCKMY PRLPMSGQFN 420 AITAQGRTDP NQDTGISIHN CTIRAADDLA ASNGVATYLG RPWKEYSRTV YMQTVMDSVI 480 HAKGWREWDG DFALSTLYYA EYSNSGPGSG TDNRVTWPGY HVINATDAAN FTVSNFLLGD 540 DWLPQTGVSY TNNLI* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02301 | PLN02301 | 5.0e-155 | 22 | 554 | 542 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02416 | PLN02416 | 4.0e-158 | 36 | 554 | 528 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 0 | 19 | 555 | 545 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN03043 | PLN03043 | 0 | 31 | 555 | 546 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| pfam01095 | Pectinesterase | 0 | 243 | 540 | 300 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF42040.1 | 0 | 1 | 555 | 1 | 564 | pectin methylesterase 3 [Pyrus communis] |
| RefSeq | XP_002268492.1 | 0 | 36 | 551 | 36 | 552 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302726.1 | 0 | 1 | 555 | 1 | 558 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002320332.1 | 0 | 29 | 555 | 33 | 560 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523112.1 | 0 | 26 | 555 | 34 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 245 | 554 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 231 | 546 | 3 | 311 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 2e-25 | 242 | 544 | 7 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-25 | 242 | 544 | 7 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 2e-25 | 242 | 544 | 7 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
