Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma19g40020.1 |
Family | CE8 |
Protein Properties | Length: 616 Molecular Weight: 67974.5 Isoelectric Point: 8.5453 |
Chromosome | Chromosome/Scaffold: 19 Start: 46502817 End: 46508273 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 304 | 599 | 0 |
LLVAKDGTGNFTTIAEAVAVAPNSSATRFVIHIKAGAYFENVEVIRKKTNLMFVGDGIGKTVVKASRNVVDGWTTFQSATVAVVGDGFIAKGITFENSAG PSKHQAVALRSGSDFSAFYKCSFVAYQDTLYVHSLRQFYRDCDVYGTVDFIFGNAATVLQNCNLYARKPNENQRNLFTAQGREDPNQNTGISILNCKVAA AADLIPVKSQFKNYLGRPWKKYSRTVYLNSYMEDLIDPKGWLEWNGTFALDTLYYGEYNNRGPGSNTSARVTWPGYRVIKNATEANQFTVRNFIQG |
Full Sequence |
---|
Protein Sequence Length: 616 Download |
MPATNHPIYP LQTSHSTKSQ YHLPSSSSSS SSSSSSSSSS SSSSIYIYIY TMYSPISRKK 60 PPMESHVDTI LSAIFVLLLS SLTHFSITAN ATRTPQENSL HFQVANSTCE GTLYSDLCVS 120 TLASFPDLTS KTLPQMIRSV VNHTIYEVTL SASNCSGLRR NLPKLDKLEQ RALDDCLNLF 180 DDTVSELETT IADLSQSTIG PKRYHDAQTL LSGAMTNLYT CLDGFAYSKG HVRDRFEEGL 240 LEISHHVSNS LAMLKKLPAG VKKLASKNEV FPGYGKIKDG FPTWLSTKDR KLLQAAVNET 300 NFNLLVAKDG TGNFTTIAEA VAVAPNSSAT RFVIHIKAGA YFENVEVIRK KTNLMFVGDG 360 IGKTVVKASR NVVDGWTTFQ SATVAVVGDG FIAKGITFEN SAGPSKHQAV ALRSGSDFSA 420 FYKCSFVAYQ DTLYVHSLRQ FYRDCDVYGT VDFIFGNAAT VLQNCNLYAR KPNENQRNLF 480 TAQGREDPNQ NTGISILNCK VAAAADLIPV KSQFKNYLGR PWKKYSRTVY LNSYMEDLID 540 PKGWLEWNGT FALDTLYYGE YNNRGPGSNT SARVTWPGYR VIKNATEANQ FTVRNFIQGN 600 EWLSSTDIPF FSDFS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02933 | PLN02933 | 0 | 130 | 614 | 494 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 303 | 600 | 298 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 51 | 610 | 567 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 71 | 615 | 559 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 69 | 613 | 576 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACQ85264.1 | 0 | 101 | 610 | 51 | 560 | pectin methylesterase [Musa acuminata AAA Group] |
EMBL | CBI36883.1 | 0 | 55 | 589 | 9 | 499 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271665.1 | 0 | 71 | 615 | 17 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301486.1 | 0 | 164 | 611 | 2 | 446 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523113.1 | 0 | 101 | 615 | 45 | 557 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 303 | 610 | 8 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 303 | 610 | 4 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-26 | 300 | 571 | 2 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-26 | 300 | 571 | 2 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-26 | 300 | 571 | 2 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO778758 | 480 | 137 | 616 | 0 |
ES850416 | 340 | 272 | 610 | 0 |
HO801873 | 315 | 97 | 411 | 0 |
HO852920 | 428 | 184 | 610 | 0 |
DT544087 | 310 | 250 | 559 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|