y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma19g40300.2 |
Family | GH3 |
Protein Properties | Length: 632 Molecular Weight: 67802.6 Isoelectric Point: 8.8514 |
Chromosome | Chromosome/Scaffold: 19 Start: 46736858 End: 46741041 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 8 | 180 | 0 |
GLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGTYAATYVRGLQGTHANRLKVAACCKHFTAYDLDNWNGMDRFHFNAQVSKQDIEDTFDVPFKMCVSEGK VASVMCSYNQVNGVPTCADPNLLKKTVRGLWQLDGYIVSDCDSVGVFYDNQHYTPTPEEAAADAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 632 Download |
MYNGGTAGLT YWSPNVNIFR DPRWGRGQET PGEDPVLAGT YAATYVRGLQ GTHANRLKVA 60 ACCKHFTAYD LDNWNGMDRF HFNAQVSKQD IEDTFDVPFK MCVSEGKVAS VMCSYNQVNG 120 VPTCADPNLL KKTVRGLWQL DGYIVSDCDS VGVFYDNQHY TPTPEEAAAD AIKAGLDLDC 180 GPFLAVHTQN AVKKGLLSEA DVNGALVNTL TVQMRLGMFD GEPTAHPYGH LGPKDVCKPA 240 HQELALEAAR QGIVLLKNTG PVLPLSSQLH RTVAVIGPNS KATITMIGNY AGVACGYTNP 300 LQGIGRYART VHQLGCQNVA CKNDKLFGPA INAARQADAT VLVMGLDQSI EAETVDRTGL 360 LLPGRQPDLV SKVAAASKGP TILVLMSGGP VDITFAKNNP RIVGILWAGY PGQAGGAAIA 420 DILFGTANPG GKLPVTWYPE EYLTKLPMTN MAMRATKSAG YPGRTYRFYN GPVVYPFGHG 480 LTYTHFVHTL ASAPTVVSVP LNGHRRANVT NISNRAIRVT HARCDKLSIT LQVDIKNVGS 540 RDGTHTLLVF SAPPAGFGHW ALEKQLVAFE KVHVPAKGQH RVGVNIHVCK LLSVVDRSGI 600 RRIPLGEHSF NIGDVKHSVS LQAAALGIIK S* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 3.0e-45 | 12 | 304 | 298 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-52 | 11 | 212 | 205 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-61 | 253 | 484 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-74 | 12 | 543 | 590 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 623 | 645 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 1 | 631 | 139 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
RefSeq | NP_563659.1 | 0 | 1 | 631 | 144 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 1 | 631 | 143 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320310.1 | 0 | 1 | 631 | 11 | 635 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515300.1 | 0 | 1 | 631 | 142 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 12 | 581 | 128 | 690 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 3u48_A | 0 | 12 | 581 | 128 | 690 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 3u4a_B | 0 | 12 | 581 | 128 | 690 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 3u4a_A | 0 | 12 | 581 | 128 | 690 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 2x41_A | 7e-37 | 13 | 622 | 117 | 708 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY274096 | 315 | 56 | 370 | 0 |
FC889191 | 308 | 56 | 363 | 0 |
DY291330 | 354 | 276 | 629 | 0 |
FG938667 | 264 | 61 | 324 | 0 |
DY800886 | 305 | 97 | 401 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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