| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma19g41350.1 |
| Family | CE8 |
| Protein Properties | Length: 572 Molecular Weight: 64044.3 Isoelectric Point: 7.3983 |
| Chromosome | Chromosome/Scaffold: 19 Start: 47634349 End: 47636863 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 254 | 551 | 0 |
| NVVVAQDGSGHFSTIADSLNACPKNKTIACVIYVKRGKYEERVVIPKGVKVFMYGDGPAHTIVSGTNTRDPRIVTTSFRAATFVVMGKGFICKDMGFTAP ADITGAPALLVLSDHAAFFNCKIDGNEGTLYAVAQRQFYRDCEILGSVDIIKGDSATVIQNSQIILKPRNSSDLVLRRNVMSAQSRLDKYQTTGLVIQNC TITAQKESMNTLNATTYLGSPYSEYSRTIIMESFLGDVIHPKGWCKWSDNYGIETATFWEFDNRGPGARTDKRVKWNGYSTIFERNQMVSYTVGRFLQ | |||
| Full Sequence |
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| Protein Sequence Length: 572 Download |
| MTLNYQRFGS YHNKMDSDNY SKEKEGMVLN IAIMVVSMIA IAMVTVSVVA HIDGSKQDAG 60 KNVKTLLSVC TKTEEPEICF RVLKHVGETA TVLNYVKAAI NATLTELLFV IRPKPRLERS 120 LTLLQQESYK DCLELLSLGK EELESLYLMA NFYVDLSELN LDDLLNSLSA VISYQHACTD 180 ELIRINSYGV LGYSLQVPIL LTRIALAIVD NFSERPNSRE PRRLEEFARW FSERERKMIE 240 SNQGDNGGEQ WPINVVVAQD GSGHFSTIAD SLNACPKNKT IACVIYVKRG KYEERVVIPK 300 GVKVFMYGDG PAHTIVSGTN TRDPRIVTTS FRAATFVVMG KGFICKDMGF TAPADITGAP 360 ALLVLSDHAA FFNCKIDGNE GTLYAVAQRQ FYRDCEILGS VDIIKGDSAT VIQNSQIILK 420 PRNSSDLVLR RNVMSAQSRL DKYQTTGLVI QNCTITAQKE SMNTLNATTY LGSPYSEYSR 480 TIIMESFLGD VIHPKGWCKW SDNYGIETAT FWEFDNRGPG ARTDKRVKWN GYSTIFERNQ 540 MVSYTVGRFL QADQWLLNRG IPYESGFVVL K* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 4.0e-85 | 206 | 565 | 369 | + pectinesterase | ||
| PLN02301 | PLN02301 | 3.0e-85 | 195 | 566 | 378 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 1.0e-89 | 170 | 567 | 408 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 5.0e-100 | 47 | 566 | 551 | + Putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-114 | 254 | 553 | 305 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN67129.1 | 0 | 62 | 545 | 43 | 541 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI26012.1 | 0 | 63 | 567 | 48 | 567 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274176.1 | 0 | 62 | 567 | 43 | 563 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002275000.1 | 0 | 63 | 570 | 48 | 570 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002519324.1 | 0 | 66 | 567 | 52 | 567 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 254 | 567 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 254 | 567 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2nt9_B | 0.0000001 | 254 | 525 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2nt9_A | 0.0000001 | 254 | 525 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2nt6_B | 0.0000001 | 254 | 525 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
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| Start | End | ||||
| 28 | 50 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| GR194961 | 279 | 284 | 556 | 0 |
| EC951748 | 266 | 302 | 563 | 0 |
| EC935178 | 266 | 302 | 563 | 0 |
| DY918939 | 289 | 284 | 566 | 0 |
| DY918231 | 289 | 284 | 566 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Glycine max | Glyma03g38750.2 | ||||
| Medicago truncatula | Medtr7g111560.1 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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