Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma19g41371.1 |
Family | CBM43 |
Protein Properties | Length: 530 Molecular Weight: 56591.4 Isoelectric Point: 6.05 |
Chromosome | Chromosome/Scaffold: 19 Start: 47645303 End: 47648640 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 392 | 473 | 3.9e-35 |
WCVAKTGVPQASLQSALDYACGMSGVDCSQIQQGGSCYNPNSLQNHASFAFNNYYQKNPAPTSCDFGGTATIVNTNPSSGSC |
Full Sequence |
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Protein Sequence Length: 530 Download |
MAKEPSLCLL FLSFLLFCSS GTTASSSSAA TTFFQKSKIS KSEIRFSVSD YKFLSTLTNT 60 NLSVDFFLNE SLVENFVSSK SKSSLVSWLE TRLLNIFPQV DIRSIVVRCG SECLRPDEMP 120 LLIPVLKSIH SFLSNLQLSR ETKVSVAFPL SFLENLNASY ESDLLRIVMF LNKIDSFVLI 180 EDIIDGESST FQSVIERATL AAAILPCKDV PVVFTIKSHD IPSSMELAQF TEAVSKYLEA 240 VSHFTKRIVA FYAQVRTTND FVLLKKEEGE EIFPLFLREN PSKVHIRRTL QDTTNSPTPP 300 SPVITPPDTP TIITVPSTNP VTVSPTNPAS TPVTVPSTTP IVPLAPTNPA NPVTNPVTSS 360 YPPPSSGSVP VTSALPPPPS TNAQAMPGGQ SWCVAKTGVP QASLQSALDY ACGMSGVDCS 420 QIQQGGSCYN PNSLQNHASF AFNNYYQKNP APTSCDFGGT ATIVNTNPSS GSCIYPSSSG 480 AGTSGSGTGS PVLGSQSPPD LNTSYSASLR PFLGCMVLAI SLVTARLTA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-24 | 391 | 462 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-36 | 391 | 467 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28117.1 | 0 | 118 | 482 | 87 | 488 | unknown [Zea mays] |
EMBL | CAN65737.1 | 0 | 115 | 528 | 32 | 516 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276666.1 | 0 | 24 | 528 | 39 | 612 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319461.1 | 0 | 22 | 523 | 36 | 607 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512573.1 | 0 | 192 | 526 | 7 | 400 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 9e-19 | 391 | 479 | 12 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |