| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma19g42370.1 |
| Family | GH2 |
| Protein Properties | Length: 972 Molecular Weight: 110195 Isoelectric Point: 6.0392 |
| Chromosome | Chromosome/Scaffold: 19 Start: 48378325 End: 48384858 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH2 | 4 | 733 | 0 |
| QHRKTTLDSGWVAARSTEVQFTGIQLTTTHPPTRPTSPWMQALVPGTVLATLVKNKAVPDPFYGLQNEHIIDIADSGRDYYTFWFFTTFNCKLSSNEHCD LNFRGINYSADVYLNGHEIILPKGMFRRHSLDVTDILHSDGTNLLAVLVHPPDHPGRIPPEGGQGGDHEIGKDVTTQYVEGWDWMAPIRDRNTGIWDEVS ISVTGPVKIIDPHLVSTFSDDYKKAYLHTTTELENRSSLTAECSLSVQVTTELEDSICLVEHLQTQDLSIPANSAVQYTFPELFFSKPNLWWPNGMGKQS LYNVVIVIDVKGFGESDSWSHHFGFRKIESHIDDATGGRLFKVNGKPIFIRGGNWILSDGLLRLSKKRYNTDIKFHADMNFNMIRCWGGGLAERPEFYHY CDYYGLLVWQEFWITGDVDGRGDPVSNPNGPLDHDLFLFSARDTVKLLRNHPSLALWVGGNEQVPPDDINAALKNDLRLHPYFESVEENSKPVGDWSPMS TDFSQYLDGTRIYIQGSMWDGFADGKGNFTDGPYEIQNPEDFFKNHFYNYGFNPEVGSVGMPVAATIRATMPSEGWQIPVFKKLPNGYVEEVPNPIWEYH KYIPYSKPTKVHDQIQLYGDAKDLDDFCLKAQLVNYIQYRALLEGWTSRMWSKYTGVLIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPVHVQLNL ATYLIEVVNTTAEEMSNVAIEASVWDLDGT | |||
| Full Sequence |
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| Protein Sequence Length: 972 Download |
| MAEQHRKTTL DSGWVAARST EVQFTGIQLT TTHPPTRPTS PWMQALVPGT VLATLVKNKA 60 VPDPFYGLQN EHIIDIADSG RDYYTFWFFT TFNCKLSSNE HCDLNFRGIN YSADVYLNGH 120 EIILPKGMFR RHSLDVTDIL HSDGTNLLAV LVHPPDHPGR IPPEGGQGGD HEIGKDVTTQ 180 YVEGWDWMAP IRDRNTGIWD EVSISVTGPV KIIDPHLVST FSDDYKKAYL HTTTELENRS 240 SLTAECSLSV QVTTELEDSI CLVEHLQTQD LSIPANSAVQ YTFPELFFSK PNLWWPNGMG 300 KQSLYNVVIV IDVKGFGESD SWSHHFGFRK IESHIDDATG GRLFKVNGKP IFIRGGNWIL 360 SDGLLRLSKK RYNTDIKFHA DMNFNMIRCW GGGLAERPEF YHYCDYYGLL VWQEFWITGD 420 VDGRGDPVSN PNGPLDHDLF LFSARDTVKL LRNHPSLALW VGGNEQVPPD DINAALKNDL 480 RLHPYFESVE ENSKPVGDWS PMSTDFSQYL DGTRIYIQGS MWDGFADGKG NFTDGPYEIQ 540 NPEDFFKNHF YNYGFNPEVG SVGMPVAATI RATMPSEGWQ IPVFKKLPNG YVEEVPNPIW 600 EYHKYIPYSK PTKVHDQIQL YGDAKDLDDF CLKAQLVNYI QYRALLEGWT SRMWSKYTGV 660 LIWKTQNPWT GLRGQFYDHL LDQTAGFYGC RCAAEPVHVQ LNLATYLIEV VNTTAEEMSN 720 VAIEASVWDL DGTCPYYRVH ENFSLLPKKV APIFKMKYPE SKDPKPVYFL LLKLYNMSDN 780 RVISRNFYWL HLSGGDYKLL EPYREKKIPL KITSKVSIEE CTYNIQMLVA NTSKRPASTS 840 STARLSDGFY GTHSLETLAC GVGIEQKSSW FKRIHRCFAG KSDGLKVTEI SGPDVGVAFF 900 LHFSVHTSKM DHNEGKDTRI LPVHYSDNYF SLVPGETMPI NISFEVPLGV TPRVILHGWN 960 YDGGEIICEV V* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10150 | PRK10150 | 1.0e-7 | 60 | 487 | 455 | + beta-D-glucuronidase; Provisional | ||
| PRK09525 | lacZ | 1.0e-8 | 194 | 465 | 301 | + beta-D-galactosidase; Reviewed | ||
| pfam00703 | Glyco_hydro_2 | 2.0e-12 | 210 | 329 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 3.0e-17 | 99 | 465 | 382 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 4.0e-45 | 47 | 688 | 665 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN82620.1 | 0 | 7 | 960 | 6 | 965 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI36793.1 | 0 | 7 | 960 | 6 | 943 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284576.1 | 0 | 7 | 960 | 6 | 965 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319539.1 | 0 | 7 | 967 | 6 | 972 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512381.1 | 0 | 7 | 964 | 6 | 969 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 35 | 790 | 74 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 35 | 790 | 74 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 35 | 790 | 74 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES793920 | 364 | 374 | 735 | 0 |
| GO871600 | 333 | 301 | 633 | 0 |
| ES832790 | 299 | 505 | 803 | 0 |
| CO978680 | 258 | 715 | 972 | 0 |
| GO847639 | 351 | 518 | 864 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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