y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma20g06250.2 |
Family | CBM43 |
Protein Properties | Length: 338 Molecular Weight: 36340.9 Isoelectric Point: 8.8346 |
Chromosome | Chromosome/Scaffold: 20 Start: 8129094 End: 8131784 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 251 | 333 | 2.2e-34 |
WCVAKPTVPDPIIQEAMDYACGSGADCKSIQPNGMCFQPNTLLAHASYAFNSYWQNTKIGGGTCDFGGTAMLVTVDPSYDKCN |
Full Sequence |
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Protein Sequence Length: 338 Download |
MSNILDHFTA ATHLLIYCSQ LLFSSLCSIC EIPKQFFAAN TMDSRAYILR VTIAILCISM 60 LASTLFPVCD AINHGRAIRG HKIRRSSPIK SLKKLKIKSL RHLNKYTPFD SFGYSDFDSY 120 GYSNFDDSYG SPSSLPLPPF NSLAPHPQPT PSSSIAPPNL APPSIGGNSS LPALSPVPSS 180 PHGAVFGPPN PRSMPPPPYP LSPPKHAPSL SPPKSAPSLN PPPLVYLPPV VFPPPPSPST 240 HRKKPPQYAL WCVAKPTVPD PIIQEAMDYA CGSGADCKSI QPNGMCFQPN TLLAHASYAF 300 NSYWQNTKIG GGTCDFGGTA MLVTVDPSYD KCNFMLT* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-24 | 250 | 321 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-39 | 250 | 334 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN78496.1 | 0 | 42 | 335 | 1 | 260 | hypothetical protein [Vitis vinifera] |
EMBL | CBI34142.1 | 0 | 127 | 335 | 59 | 251 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264622.1 | 0 | 42 | 336 | 1 | 259 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002516415.1 | 2.8026e-45 | 242 | 335 | 169 | 261 | conserved hypothetical protein [Ricinus communis] |
RefSeq | XP_002520569.1 | 0 | 42 | 334 | 1 | 246 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-21 | 245 | 334 | 7 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |