Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma20g22525.1 |
Family | CBM43 |
Protein Properties | Length: 609 Molecular Weight: 64364.4 Isoelectric Point: 8.6674 |
Chromosome | Chromosome/Scaffold: 20 Start: 32494197 End: 32497879 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 407 | 488 | 2e-34 |
WCVAKQGAPEASLQSALDYACGMGGADCSQIQQGGNCYSPVTLQSHASVAFNSYYQKNPAPTSCDFGGTATLVNTNPSTGSC |
Full Sequence |
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Protein Sequence Length: 609 Download |
MAKEASLCLL FLLSSLTISC SGSVEGFSYR ERGHTSTSAR TISFLQQSNV PPSQIRIFVT 60 DHRILSTLSY SKVPTDVYLN KSQVENFITS KPSELKAHLL NILQNSNIKS IIASCGSEGL 120 AQNEMPLFLH ALISISSVLR ELHLGREVKV SVAFPLSFLE KLNASHENNI RRILSVIKEM 180 KSFVMVEDYI DGEFSIGDHF VHAIIKRATL AASILPCKDV PIVLAIKSTV IFPSMELAQF 240 SERVSKYLES KTHIRKRIAA LYIEVHRTED FASKKLKRRS LDDTTNPTNT VFPTNPASST 300 PIITPPDTPT IITVPATNPV TISPSNPAAM PVTVPSTTPV PIPPTNPANS PVPVSNPATT 360 TPVATPPPVT IPVTSYPPPS GNVPVVNPQP QPPPANTNAP AIQGQSWCVA KQGAPEASLQ 420 SALDYACGMG GADCSQIQQG GNCYSPVTLQ SHASVAFNSY YQKNPAPTSC DFGGTATLVN 480 TNPSTGSCIF PSSSSTTTTT PKSSSPPTPP TQSSPTTLPP PSPLTPAPSI PTAPPTSSSS 540 GTGPFGYGAP PSVLNSSNPA SGIMPGFASD SPPVVNTTSA SRSVSLRPFV GFTILMVSFV 600 TTRLSMHP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-24 | 406 | 477 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-36 | 406 | 482 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28414.1 | 0 | 1 | 495 | 10 | 512 | unknown [Zea mays] |
EMBL | CAN65737.1 | 0 | 119 | 607 | 30 | 518 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276666.1 | 0 | 1 | 606 | 1 | 613 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319461.1 | 0 | 1 | 600 | 1 | 607 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512573.1 | 0 | 196 | 607 | 1 | 405 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-17 | 406 | 495 | 12 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |