Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma20g27011.1 |
Family | GH3 |
Protein Properties | Length: 795 Molecular Weight: 86298.1 Isoelectric Point: 6.1147 |
Chromosome | Chromosome/Scaffold: 20 Start: 36291912 End: 36295499 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 68 | 321 | 0 |
AGISRLGVPAYEWWSEALHGVSNLGPGTRFDKKVPGATSFPAVILSAASFNASLWQKMGQVVSTEARAMYNVDLAGLTFWSPNVNVFRDPRWGRGQETPG EDPLVVSRYAVMYLRGLQEVEDEASAKADRLKVSSCCKHYTAYDLDNWKGIDRFHFDAKVTKQDLEDSYQPPFKSCVVEGHVSSVMCSYNRVNGIPTCAD PDLLKGIIRGQWGLDGYIVSDCDSVEVYYNAIHYTATPEDAVALALKAGLNMNC |
Full Sequence |
---|
Protein Sequence Length: 795 Download |
MKNQLMFLSM FLSFLILPTA SQKHACGSAK TSNFPFCDTS LSYEDRAKDL VSRLTLQEKT 60 QQLVNPSAGI SRLGVPAYEW WSEALHGVSN LGPGTRFDKK VPGATSFPAV ILSAASFNAS 120 LWQKMGQVVS TEARAMYNVD LAGLTFWSPN VNVFRDPRWG RGQETPGEDP LVVSRYAVMY 180 LRGLQEVEDE ASAKADRLKV SSCCKHYTAY DLDNWKGIDR FHFDAKVTKQ DLEDSYQPPF 240 KSCVVEGHVS SVMCSYNRVN GIPTCADPDL LKGIIRGQWG LDGYIVSDCD SVEVYYNAIH 300 YTATPEDAVA LALKAGLNMN CGDFLKKYTA NAVNLKKVDV ATVDQALVYN YIVLMRLGFF 360 DDPKSLPFAN LGPSDVCTKD NQQLALDAAK QGIVLLENNN GALPLSQTNI KKLAVIGPNA 420 NATTVMISNY AGIPCRYTSP LQGLQKYISS VNYAPGCSNV KCDNQSLIAA AVKAAASADA 480 VVLVVGLDQS IEAEGLDREN LTLPGFQEKF VKDVAGATKG KVILVIMAAG PIDISSTKSV 540 SNIGGILWVG YPGQAGGDAI AQVIFGDYNP GGRSPFTWYP QSYVDQVPMT DMNMRANKSR 600 NFPGRTYRFY NGNSLYEFGH GLSYSTFSMY VASAPSSIMI ENTSISEPHN MLSSNNSGTQ 660 VESLSDGQAI DISTINCQDL TFLLVIGVKN NGPLNGSHVV LVFWEPATSE FVIGAPIKQL 720 IGFERVQVVV GVTEFVTVKI DICQLISNVD SDGKRKLVIG QHTILVGSSS ETQVRHHIDV 780 KLSGSMNGKE FMSE* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-53 | 393 | 626 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 5.0e-56 | 68 | 444 | 383 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 4.0e-62 | 55 | 346 | 321 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 8.0e-67 | 71 | 720 | 699 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 19 | 767 | 754 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB02547.1 | 0 | 4 | 794 | 5 | 785 | beta-1,4-xylosidase [Arabidopsis thaliana] |
EMBL | CAN82161.1 | 0 | 2 | 786 | 3 | 790 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_188596.1 | 0 | 4 | 784 | 5 | 775 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264114.1 | 0 | 2 | 785 | 27 | 813 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002527511.1 | 0 | 15 | 788 | 16 | 792 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 50 | 771 | 10 | 726 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 3u48_A | 0 | 50 | 771 | 10 | 726 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 3u4a_B | 0 | 50 | 771 | 10 | 726 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 3u4a_A | 0 | 50 | 771 | 10 | 726 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 2x41_A | 4e-35 | 45 | 628 | 2 | 604 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |