Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma20g27040.1 |
Family | GH10 |
Protein Properties | Length: 581 Molecular Weight: 64710.5 Isoelectric Point: 7.028 |
Chromosome | Chromosome/Scaffold: 20 Start: 36309826 End: 36314114 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH10 | 232 | 488 | 0 |
NFPFGCGMNHYILTNEDYQSWFVSRFKFTTFTNEMKWYSTEKKQGEENYTIADAMLKFTQENGISVRGHNIFWDDPKYQPDWVRTLSPADLTKAAAKRMK SVLSRYKGELIAWDVMNENLHFHFYEDKFGENASAVAYATAYELDPEPKLFLNEFNTIEYSGDEASNPAKYIKKLKEILSFPGVSGMSAAIGLQGHFASG QPNLAYMRSGLDLLATTGLPIWLTEASVDPQPSQAEYLEEVLREAYSHPAVEGIIMF |
Full Sequence |
---|
Protein Sequence Length: 581 Download |
MKVAAEGCNL LLFITSYLLL ISGLGVHSLS YDHSATTKCL AEPRRAQYGG GIIVNPGFDH 60 NIEGWTAFGN GAIKEVMSNG GNRFIVAHNR TQPLDSFSQK VQLKKGMLYT FSAWLQVSEG 120 SDTVSVMFKT KRNEMVRGGQ VIAKHGCWTL LKGGIAANFS SPVEILFESK NSAEEIWADN 180 ISLQPFTKKQ WRSLQDASIE RVRKRRVRFQ ITHVNETALK GAKVITRPIK LNFPFGCGMN 240 HYILTNEDYQ SWFVSRFKFT TFTNEMKWYS TEKKQGEENY TIADAMLKFT QENGISVRGH 300 NIFWDDPKYQ PDWVRTLSPA DLTKAAAKRM KSVLSRYKGE LIAWDVMNEN LHFHFYEDKF 360 GENASAVAYA TAYELDPEPK LFLNEFNTIE YSGDEASNPA KYIKKLKEIL SFPGVSGMSA 420 AIGLQGHFAS GQPNLAYMRS GLDLLATTGL PIWLTEASVD PQPSQAEYLE EVLREAYSHP 480 AVEGIIMFSG PAQAGFNATT LADETFKNTA AGDVVDKLIQ EWGTGPNIAT ADSRGIVDIS 540 LHHGDYDVTV THPLIHSPIT LNLSVKKDFS LETIHVKMHA * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 6.0e-7 | 50 | 153 | 113 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 4.0e-34 | 264 | 478 | 229 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 1.0e-51 | 229 | 515 | 310 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 7.0e-74 | 266 | 515 | 273 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19437.1 | 0 | 1 | 580 | 1 | 581 | unknown [Glycine max] |
RefSeq | XP_002313181.1 | 0 | 26 | 580 | 20 | 575 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313182.1 | 0 | 36 | 567 | 2 | 533 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532419.1 | 0 | 39 | 579 | 8 | 549 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002532422.1 | 0 | 38 | 578 | 22 | 562 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1i1x_A | 2e-23 | 235 | 459 | 18 | 240 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1i1w_A | 2e-23 | 235 | 459 | 18 | 240 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2bnj_A | 2e-23 | 235 | 459 | 18 | 240 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1gor_A | 3e-23 | 235 | 459 | 18 | 240 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1goq_A | 3e-23 | 235 | 459 | 18 | 240 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |