Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma20g29030.2 |
Family | GT47 |
Protein Properties | Length: 496 Molecular Weight: 57407.4 Isoelectric Point: 9.0115 |
Chromosome | Chromosome/Scaffold: 20 Start: 37988743 End: 37990619 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 98 | 436 | 0 |
KVFVYNLPDTFNQQIILNCDNLNPWSSRCDALSNDGFGRAATSLAGILPEDLLPAWHWTDQFVTEIIFHNRLINHKCRVMEPESATAFYIPFYAGLAVGK YLWFNSTAEERDRHCDMMLQWIQDQPFFKRSNGWDHFITMGRITWDFRRSKDRDWGSSCIYKPGIRNVTRLLIERNPWDYFDVGVPYPTGFHPRSKSDVT RWQSFVRERQRHALFCFAGAPRRAFRDDFRAILLSQCRDSGESCRAVNCTGTRCSNGTSAILETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRR TAYLQYEWFLPGEPESYSVFIDRNAVKNGTLTVKNVLER |
Full Sequence |
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Protein Sequence Length: 496 Download |
MLPKSVPPAE PQPQTLNTKT TLTSFFTSLL QPRFSPQNPR TWILFTVLFI QILLLCNLRS 60 FPSPSIPPPL PAAADTKRTT NTTGHHSYRT VYHSGSGKVF VYNLPDTFNQ QIILNCDNLN 120 PWSSRCDALS NDGFGRAATS LAGILPEDLL PAWHWTDQFV TEIIFHNRLI NHKCRVMEPE 180 SATAFYIPFY AGLAVGKYLW FNSTAEERDR HCDMMLQWIQ DQPFFKRSNG WDHFITMGRI 240 TWDFRRSKDR DWGSSCIYKP GIRNVTRLLI ERNPWDYFDV GVPYPTGFHP RSKSDVTRWQ 300 SFVRERQRHA LFCFAGAPRR AFRDDFRAIL LSQCRDSGES CRAVNCTGTR CSNGTSAILE 360 TFLDSDFCLQ PRGDSFTRRS IFDCMVAGSI PVFFWRRTAY LQYEWFLPGE PESYSVFIDR 420 NAVKNGTLTV KNVLERFTKE EVRRMREKVI EYIPRLVYAN TKQGLEGVND AFDVAIEGVF 480 KRIKEQEQPQ FHKWK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00738 | HGTP_anticodon | 0.006 | 396 | 454 | 59 | + HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b). | ||
pfam03016 | Exostosin | 1.0e-47 | 98 | 437 | 355 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_201028.1 | 0 | 96 | 495 | 120 | 517 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270309.1 | 0 | 1 | 487 | 1 | 484 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318866.1 | 0 | 1 | 491 | 1 | 510 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321855.1 | 0 | 1 | 494 | 2 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510893.1 | 0 | 40 | 494 | 48 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY290373 | 373 | 104 | 475 | 0 |
HO786252 | 212 | 107 | 318 | 0 |
HO786252 | 128 | 329 | 456 | 0 |
DY267021 | 343 | 133 | 475 | 0 |
EH260217 | 259 | 238 | 496 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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