| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma20g30760.6 |
| Family | GT1 |
| Protein Properties | Length: 397 Molecular Weight: 44061.9 Isoelectric Point: 6.2309 |
| Chromosome | Chromosome/Scaffold: 20 Start: 39455596 End: 39465163 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT1 | 18 | 354 | 0 |
| QRKQLKAIIDSLPPACTAPDMETGVPFRAQAIIANPPAYGHVHVAEALAVPLHIFFTMPWTPTYEFPHPLARVPQSAGYWLSYIIVDLLIWWGMRRIINN FRKATLKLAPIAYFSMYRGSISHLPTSYMWSPHVVPKPSDWGPLVDVVGYCFLSLASKYQPREDFVQWIKKGPPPLYFGFGSMPLEDPKGTTDVILEALK DTEQRGIIDRGWGNLGNLAELSDNVFLLEECPHDWLFPQCSAVVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRIYEKELGPAPIPISQLNVENLSN AIRFMLQPEVKSRAMEIAKLIENEDGVAAAVDAFHRH | |||
| Full Sequence |
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| Protein Sequence Length: 397 Download |
| MARNKGLIPS GPAEISVQRK QLKAIIDSLP PACTAPDMET GVPFRAQAII ANPPAYGHVH 60 VAEALAVPLH IFFTMPWTPT YEFPHPLARV PQSAGYWLSY IIVDLLIWWG MRRIINNFRK 120 ATLKLAPIAY FSMYRGSISH LPTSYMWSPH VVPKPSDWGP LVDVVGYCFL SLASKYQPRE 180 DFVQWIKKGP PPLYFGFGSM PLEDPKGTTD VILEALKDTE QRGIIDRGWG NLGNLAELSD 240 NVFLLEECPH DWLFPQCSAV VHHGGAGTTA TGLKAGCPTT IVPFFGDQFF WGDRIYEKEL 300 GPAPIPISQL NVENLSNAIR FMLQPEVKSR AMEIAKLIEN EDGVAAAVDA FHRHLPDELP 360 LPTPTPTPVE EEDHLNPLQW FFLRLGRFCC APCGGV* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR01426 | MGT | 0.002 | 187 | 349 | 166 | + glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. | ||
| pfam03033 | Glyco_transf_28 | 1.0e-8 | 4 | 84 | 81 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| COG1819 | COG1819 | 1.0e-20 | 60 | 353 | 301 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 4.0e-89 | 1 | 354 | 358 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18214.1 | 0 | 1 | 394 | 307 | 697 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175027.1 | 0 | 1 | 396 | 219 | 615 | UDP-glucose:sterol glucosyltransferase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002265312.1 | 0 | 1 | 394 | 291 | 681 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302172.1 | 0 | 1 | 393 | 226 | 615 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524293.1 | 0 | 1 | 393 | 187 | 577 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 1e-24 | 185 | 347 | 216 | 374 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 3h4i_A | 1e-24 | 185 | 347 | 216 | 374 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1iir_A | 2e-24 | 181 | 356 | 229 | 403 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 1rrv_B | 5e-20 | 55 | 338 | 107 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 5e-20 | 55 | 338 | 107 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO801427 | 390 | 1 | 383 | 0 |
| DT547914 | 277 | 1 | 277 | 0 |
| GT034671 | 323 | 12 | 333 | 0 |
| DV143911 | 273 | 50 | 322 | 0 |
| GE482070 | 285 | 6 | 290 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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