| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma20g36040.1 |
| Family | GT5 |
| Protein Properties | Length: 606 Molecular Weight: 66497.2 Isoelectric Point: 8.1935 |
| Chromosome | Chromosome/Scaffold: 20 Start: 44258252 End: 44262983 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 81 | 577 | 0 |
| LIFVGTEVAPWSKTGGLGDVLGGLPPALAGNGHRVMTVSPRYDQYKDAWDTSVTVEVKIGDRIETVRFFHCYKRGVDRVFVDHPCFLEKVWGKTGSKLYG PSAGVDYEDNQLRFSLLCQAALEAPRVLNLNSSKYFSGPYGEDVIFIANDWHTALLPCYLKSMYQTKGIYKNAKVAYCIHNIAYQGRHSFADFSLLNLPN KFKSSFDFTDGHVKPVKGRKLNWMKAAILESDRVLTVSPYYAQELVTGEERGVELDNVIRSRGITGIVNGMDNREWSPKTDKFIDLHYDATTVTEAKSLL KEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVEAIPKFIDQNVQIMILGTGKKIMEKQIEQLEKIYPDKARGVAKFNGPLAHKIIAGADFIVIPSRF EPCGLVQLHAMPYGTVPIVSSTGGLVDTVQEGYTGFHMGAFNVECEAVDPVDVEKLATTVKRALGTYGTPAMTQMIQNCMSQDFSWKGPAKHWEKVL | |||
| Full Sequence |
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| Protein Sequence Length: 606 Download |
| MATVSYAVSG SACQSHRGAS RTEAKVNYSA QVSLNCQGLR SLNKLHVRTT RAAKTKTLLS 60 AKSNKSGREG VLGRIECGMN LIFVGTEVAP WSKTGGLGDV LGGLPPALAG NGHRVMTVSP 120 RYDQYKDAWD TSVTVEVKIG DRIETVRFFH CYKRGVDRVF VDHPCFLEKV WGKTGSKLYG 180 PSAGVDYEDN QLRFSLLCQA ALEAPRVLNL NSSKYFSGPY GEDVIFIAND WHTALLPCYL 240 KSMYQTKGIY KNAKVAYCIH NIAYQGRHSF ADFSLLNLPN KFKSSFDFTD GHVKPVKGRK 300 LNWMKAAILE SDRVLTVSPY YAQELVTGEE RGVELDNVIR SRGITGIVNG MDNREWSPKT 360 DKFIDLHYDA TTVTEAKSLL KEALQAEVGL PVDRNIPLIG FIGRLEEQKG SDILVEAIPK 420 FIDQNVQIMI LGTGKKIMEK QIEQLEKIYP DKARGVAKFN GPLAHKIIAG ADFIVIPSRF 480 EPCGLVQLHA MPYGTVPIVS STGGLVDTVQ EGYTGFHMGA FNVECEAVDP VDVEKLATTV 540 KRALGTYGTP AMTQMIQNCM SQDFSWKGPA KHWEKVLLSL EVAGSEPGID GDEIAPLAKE 600 NVATP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 1.0e-78 | 175 | 580 | 411 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 5.0e-112 | 79 | 575 | 517 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 2.0e-130 | 79 | 576 | 507 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 2.0e-170 | 79 | 580 | 510 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-172 | 80 | 577 | 511 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABP35817.1 | 0 | 1 | 605 | 1 | 603 | granule-bound starch synthase Ia precursor [Vigna unguiculata] |
| GenBank | ACB30382.1 | 0 | 1 | 605 | 1 | 606 | granule bound starch synthase Ia precursor [Vigna radiata] |
| GenBank | ACB30384.1 | 0 | 1 | 605 | 1 | 610 | granule bound starch synthase Ia precursor [Lotus japonicus] |
| GenBank | ACB97679.1 | 0 | 1 | 605 | 1 | 608 | granule bound starch synthase Ia precursor [Glycine max] |
| DDBJ | BAA82346.1 | 0 | 1 | 605 | 1 | 606 | granule-bound starch synthase I [Phaseolus vulgaris] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 79 | 605 | 10 | 536 | A Chain A, Glutathionylspermidine SynthetaseAMIDASE C59A COMPLEX WITH ADP AND Gsp |
| PDB | 3vue_A | 0 | 79 | 605 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 79 | 581 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 79 | 582 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 79 | 582 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 616 | 1 | 606 | 0 |
| HO825853 | 518 | 87 | 604 | 0 |
| HO629148 | 611 | 1 | 606 | 0 |
| CN831271 | 382 | 225 | 606 | 0 |
| HO778340 | 376 | 73 | 446 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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