| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma20g37760.1 |
| Family | GH2 |
| Protein Properties | Length: 975 Molecular Weight: 110527 Isoelectric Point: 6.6108 |
| Chromosome | Chromosome/Scaffold: 20 Start: 45537486 End: 45543731 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH2 | 31 | 758 | 0 |
| PSASTQPWMEAIVPGTVLATLVKNKAVPDPFRGLGNEAILDIADSGRDYYTFWFFTTFQCKLSGNQHCDLNFRGINYRADVYLNGHQMVLPKGMFRRHSL DVTNIIHSDGSNLLAVLVHPPDHPGSIPPQGGQGGDHEIGKDVATQYVQGWDWMAPIRDRNTGIWDEVSISITGPVKIIDPHLVSSFFDNYKRVYLHAST ELENRSSSTAECSLSIHATTELEGSIHLVEQLQTQNLSIPARSRVQYTFPELFFYKPNLWWPNGMGKQSLYNVIINIDIKGYGESDSWNHHFGFRKIESH IDGATGGRLFKVNGEPIFIRGGNWILSDGLLRLSKKRYETDIKFHADMNFNMIRCWGGGLTERPEFYHYCDYYGLLVWQEFWITGDVDGRGIPVSNPNGP LDHDLFLFCARDTVKLLRNHPSLALWVGGNEQTPPDDINVALKNDLKLHPYFEHGEEKEKPVGDLSPRLGDPSQYLDGTRIYIQGSLWDGFADGKGDFTD GPYEIQNPEDFFTDSFYNYGFNPEVGSVGMPVAATIRATMPSEGWQIPLFNKLSHGYVEEVPNPIWKYHKYIPYSNPTKKVHDQIQLYGDVKDLDDFCLK AQLVNYIQYRALLEGWTSHMWKKYTGVLIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLATYFIEVVNTTSEELSSVAMEVSVWDLEGT RPHYKVHENLTALPKKVTPIVEMKYSKS | |||
| Full Sequence |
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| Protein Sequence Length: 975 Download |
| MAKTTLDSGW LAARSTEVHF TGTQLTTTHP PSASTQPWME AIVPGTVLAT LVKNKAVPDP 60 FRGLGNEAIL DIADSGRDYY TFWFFTTFQC KLSGNQHCDL NFRGINYRAD VYLNGHQMVL 120 PKGMFRRHSL DVTNIIHSDG SNLLAVLVHP PDHPGSIPPQ GGQGGDHEIG KDVATQYVQG 180 WDWMAPIRDR NTGIWDEVSI SITGPVKIID PHLVSSFFDN YKRVYLHAST ELENRSSSTA 240 ECSLSIHATT ELEGSIHLVE QLQTQNLSIP ARSRVQYTFP ELFFYKPNLW WPNGMGKQSL 300 YNVIINIDIK GYGESDSWNH HFGFRKIESH IDGATGGRLF KVNGEPIFIR GGNWILSDGL 360 LRLSKKRYET DIKFHADMNF NMIRCWGGGL TERPEFYHYC DYYGLLVWQE FWITGDVDGR 420 GIPVSNPNGP LDHDLFLFCA RDTVKLLRNH PSLALWVGGN EQTPPDDINV ALKNDLKLHP 480 YFEHGEEKEK PVGDLSPRLG DPSQYLDGTR IYIQGSLWDG FADGKGDFTD GPYEIQNPED 540 FFTDSFYNYG FNPEVGSVGM PVAATIRATM PSEGWQIPLF NKLSHGYVEE VPNPIWKYHK 600 YIPYSNPTKK VHDQIQLYGD VKDLDDFCLK AQLVNYIQYR ALLEGWTSHM WKKYTGVLIW 660 KTQNPWTGLR GQFYDHLLDQ TAGFYGCRCA AEPIHVQLNL ATYFIEVVNT TSEELSSVAM 720 EVSVWDLEGT RPHYKVHENL TALPKKVTPI VEMKYSKSKN PRPVYFLLLK LYNMSDNTIL 780 SRNFYWLHLA GGDYMLLEPY RKKKVPLKIT SEVFIEGSTY ILRMHVQNTS KKPDSKSLTL 840 VHGSTARLSN NCFVTDSPET IDSGTGKEHE VGWFKRIHKC FAGKSDGLKV SEINGQDIGV 900 AFFLHFSVHA SNKDHKEGED TRILPVHYSD NYFSVVPGET MTIKISFEVP PGVSPRVTLH 960 GWNYQGQTIH EALY* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02836 | Glyco_hydro_2_C | 0.0002 | 339 | 461 | 133 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK09525 | lacZ | 8.0e-6 | 323 | 461 | 161 | + beta-D-galactosidase; Reviewed | ||
| pfam00703 | Glyco_hydro_2 | 1.0e-9 | 206 | 325 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 2.0e-10 | 95 | 461 | 382 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 2.0e-36 | 43 | 461 | 425 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN82620.1 | 0 | 1 | 963 | 4 | 965 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI36793.1 | 0 | 1 | 963 | 4 | 943 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284576.1 | 0 | 1 | 963 | 4 | 965 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319539.1 | 0 | 1 | 965 | 4 | 967 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512381.1 | 0 | 1 | 966 | 4 | 968 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 31 | 787 | 74 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 31 | 787 | 74 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 31 | 787 | 74 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES793920 | 382 | 369 | 746 | 0 |
| GO871600 | 334 | 297 | 630 | 0 |
| ES832790 | 306 | 495 | 800 | 0 |
| FG882426 | 262 | 354 | 615 | 0 |
| GO847639 | 353 | 514 | 866 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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