Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.001G007900.1 |
Family | GT47 |
Protein Properties | Length: 642 Molecular Weight: 73400.1 Isoelectric Point: 9.7996 |
Chromosome | Chromosome/Scaffold: 01 Start: 719327 End: 722037 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 310 | 592 | 0 |
RILKVYVYKDGKKPIFHLPILKGLYASEGWFMKLMQGNKHFVVKDPRRAHLFYMPFSSRMLEYTLYVRNSHNRTNLRQFLKDYTETISAKYPYFNRTDGA DHFLVACHDWAPYETRHHMEHCIKALCNADVTAGFKIGRDVSLPETYVRSARNPLRDLGGKPASQRHILAFYAGSMHGYLRPILLKHWKDKDADMRILGP MPPGVASKMNYIQHMKSTKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFFEVLDWGAFSIILAEKDIPNLKDILTSI |
Full Sequence |
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Protein Sequence Length: 642 Download |
MELLNGFKNP FRSEYKRWVF LVGLVAISHL LFQSFLLPYG NALRSLLLPG IDASSEGNYG 60 NVVSRVRSGS KSVVVRNTLT INGSDFSTRD VILFNGGNGG GDVGISSRKI GDWVEKGVSK 120 VIFDGNVDDD YASENGEDLN ENAVLEEVIR DQDNYVNATS RIEQVAKHGR EVSTGELRDV 180 NTTSQYPALS SMANPTPNAG SSFRSTSLQS DHTVSKSNSL MVVKQGKKKM RCEMPPKTVT 240 TIDEMNHILL RHRRSSRAMR PRRSSIRDQE IFAAKSRIEN GPVITNDQDL YAPVFRNVSL 300 FKRSYELMER ILKVYVYKDG KKPIFHLPIL KGLYASEGWF MKLMQGNKHF VVKDPRRAHL 360 FYMPFSSRML EYTLYVRNSH NRTNLRQFLK DYTETISAKY PYFNRTDGAD HFLVACHDWA 420 PYETRHHMEH CIKALCNADV TAGFKIGRDV SLPETYVRSA RNPLRDLGGK PASQRHILAF 480 YAGSMHGYLR PILLKHWKDK DADMRILGPM PPGVASKMNY IQHMKSTKYC ICPKGYEVNS 540 PRVVESIFYE CVPVIISDNF VPPFFEVLDW GAFSIILAEK DIPNLKDILT SIPQERYLAL 600 QLGVQKVQRH FLWHAKPERY DLFHMTLHSI WYNRVYQIKL R* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-61 | 312 | 592 | 302 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN76867.1 | 0 | 1 | 637 | 710 | 1390 | hypothetical protein [Vitis vinifera] |
EMBL | CAN76867.1 | 0 | 1 | 639 | 1 | 711 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_197468.1 | 0 | 76 | 641 | 65 | 600 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002283936.1 | 0 | 234 | 641 | 1 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514248.1 | 0 | 38 | 641 | 38 | 676 | catalytic, putative [Ricinus communis] |