y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.001G007900.2 |
Family | GT47 |
Protein Properties | Length: 451 Molecular Weight: 52539 Isoelectric Point: 10.1825 |
Chromosome | Chromosome/Scaffold: 01 Start: 719327 End: 722037 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 119 | 401 | 0 |
RILKVYVYKDGKKPIFHLPILKGLYASEGWFMKLMQGNKHFVVKDPRRAHLFYMPFSSRMLEYTLYVRNSHNRTNLRQFLKDYTETISAKYPYFNRTDGA DHFLVACHDWAPYETRHHMEHCIKALCNADVTAGFKIGRDVSLPETYVRSARNPLRDLGGKPASQRHILAFYAGSMHGYLRPILLKHWKDKDADMRILGP MPPGVASKMNYIQHMKSTKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFFEVLDWGAFSIILAEKDIPNLKDILTSI |
Full Sequence |
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Protein Sequence Length: 451 Download |
MANPTPNAGS SFRSTSLQSD HTVSKSNSLM VVKQGKKKMR CEMPPKTVTT IDEMNHILLR 60 HRRSSRAMRP RRSSIRDQEI FAAKSRIENG PVITNDQDLY APVFRNVSLF KRSYELMERI 120 LKVYVYKDGK KPIFHLPILK GLYASEGWFM KLMQGNKHFV VKDPRRAHLF YMPFSSRMLE 180 YTLYVRNSHN RTNLRQFLKD YTETISAKYP YFNRTDGADH FLVACHDWAP YETRHHMEHC 240 IKALCNADVT AGFKIGRDVS LPETYVRSAR NPLRDLGGKP ASQRHILAFY AGSMHGYLRP 300 ILLKHWKDKD ADMRILGPMP PGVASKMNYI QHMKSTKYCI CPKGYEVNSP RVVESIFYEC 360 VPVIISDNFV PPFFEVLDWG AFSIILAEKD IPNLKDILTS IPQERYLALQ LGVQKVQRHF 420 LWHAKPERYD LFHMTLHSIW YNRVYQIKLR * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-62 | 121 | 401 | 302 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN76867.1 | 0 | 5 | 446 | 949 | 1390 | hypothetical protein [Vitis vinifera] |
EMBL | CAN76867.1 | 0 | 49 | 448 | 264 | 711 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_197468.1 | 0 | 39 | 450 | 199 | 600 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002283936.1 | 0 | 43 | 450 | 1 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514248.1 | 0 | 1 | 450 | 230 | 676 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EG631332 | 278 | 174 | 451 | 0 |
ES808098 | 335 | 86 | 420 | 0 |
DV712689 | 315 | 27 | 341 | 0 |
EV026079 | 246 | 125 | 370 | 0 |
GT051299 | 334 | 108 | 436 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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