Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.001G018300.4 |
Family | CE8 |
Protein Properties | Length: 526 Molecular Weight: 57996.6 Isoelectric Point: 8.2995 |
Chromosome | Chromosome/Scaffold: 01 Start: 1706893 End: 1710354 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 212 | 508 | 0 |
NVVVAADGSGNFTRIMDAVETAPDKSLNRYVIYIKRGLYKENVEIKKKKWNLMMIGDGMDVTVISGNRSFIDGWTTFRSATFAVSGRGFIARDITFENTA GPQKHQAVALRSDSDLSVFFRCAIKGYQDSLYTHTMRQFYRECKITGTVDFIFGDGAVLFQNCQILAKQGLPNQKNTITAQGRKDPNQPTGFSIQFCNIS ADTDLLPSVNSTPTYLGRPWKLYSRTIIMQSYISDAIRPQGWLEWNQDFALDTLYYAEYMNNGPGASLSERVKWPGYHVLNNSAQAVNFTVAQFIEG |
Full Sequence |
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Protein Sequence Length: 526 Download |
MPKPFHLLVF FLVALCLCTS SNASSTTNEF LETECLKVPA TEFIGSLKTT IDAIRKATSV 60 VSQFGGFFHD FRLSNAISDC LDLLDSSADE LSWTMFASQN PNAKDNSTGD LSSDLRTWLS 120 AAMVNQQTCI DGFEGTNSMV KTVVSGSLNQ ITSLVRNLLI MVHPGPNSKS NGTRNGSQKG 180 GGGGGHPGQN RFPVWFKRED RRLLQINGVT ANVVVAADGS GNFTRIMDAV ETAPDKSLNR 240 YVIYIKRGLY KENVEIKKKK WNLMMIGDGM DVTVISGNRS FIDGWTTFRS ATFAVSGRGF 300 IARDITFENT AGPQKHQAVA LRSDSDLSVF FRCAIKGYQD SLYTHTMRQF YRECKITGTV 360 DFIFGDGAVL FQNCQILAKQ GLPNQKNTIT AQGRKDPNQP TGFSIQFCNI SADTDLLPSV 420 NSTPTYLGRP WKLYSRTIIM QSYISDAIRP QGWLEWNQDF ALDTLYYAEY MNNGPGASLS 480 ERVKWPGYHV LNNSAQAVNF TVAQFIEGDL WLPSTGVKYT SGFGV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 1.0e-173 | 107 | 525 | 426 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 4.0e-177 | 103 | 522 | 423 | + pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 1.0e-180 | 46 | 524 | 484 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 19 | 525 | 507 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 212 | 509 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92470.1 | 0 | 17 | 525 | 28 | 528 | unknown [Populus trichocarpa] |
DDBJ | BAF42041.1 | 0 | 23 | 525 | 24 | 509 | pectin methylesterase 4 [Pyrus communis] |
EMBL | CBI29628.1 | 0 | 19 | 525 | 23 | 527 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | Q43062 | 0 | 23 | 525 | 36 | 522 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 17 | 525 | 20 | 520 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 209 | 523 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 209 | 523 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 3e-21 | 209 | 431 | 2 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-21 | 209 | 431 | 2 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-21 | 209 | 431 | 2 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |