Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.001G018300.6 |
Family | CE8 |
Protein Properties | Length: 440 Molecular Weight: 48616.1 Isoelectric Point: 9.24 |
Chromosome | Chromosome/Scaffold: 01 Start: 1706893 End: 1710316 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 126 | 422 | 0 |
NVVVAADGSGNFTRIMDAVETAPDKSLNRYVIYIKRGLYKENVEIKKKKWNLMMIGDGMDVTVISGNRSFIDGWTTFRSATFAVSGRGFIARDITFENTA GPQKHQAVALRSDSDLSVFFRCAIKGYQDSLYTHTMRQFYRECKITGTVDFIFGDGAVLFQNCQILAKQGLPNQKNTITAQGRKDPNQPTGFSIQFCNIS ADTDLLPSVNSTPTYLGRPWKLYSRTIIMQSYISDAIRPQGWLEWNQDFALDTLYYAEYMNNGPGASLSERVKWPGYHVLNNSAQAVNFTVAQFIEG |
Full Sequence |
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Protein Sequence Length: 440 Download |
MQLFCVISFS LNCVFAAKDN STGDLSSDLR TWLSAAMVNQ QTCIDGFEGT NSMVKTVVSG 60 SLNQITSLVR NLLIMVHPGP NSKSNGTRNG SQKGGGGGGH PGQNRFPVWF KREDRRLLQI 120 NGVTANVVVA ADGSGNFTRI MDAVETAPDK SLNRYVIYIK RGLYKENVEI KKKKWNLMMI 180 GDGMDVTVIS GNRSFIDGWT TFRSATFAVS GRGFIARDIT FENTAGPQKH QAVALRSDSD 240 LSVFFRCAIK GYQDSLYTHT MRQFYRECKI TGTVDFIFGD GAVLFQNCQI LAKQGLPNQK 300 NTITAQGRKD PNQPTGFSIQ FCNISADTDL LPSVNSTPTY LGRPWKLYSR TIIMQSYISD 360 AIRPQGWLEW NQDFALDTLY YAEYMNNGPG ASLSERVKWP GYHVLNNSAQ AVNFTVAQFI 420 EGDLWLPSTG VKYTSGFGV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 4.0e-176 | 21 | 439 | 426 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-179 | 16 | 436 | 424 | + pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 1.0e-179 | 28 | 438 | 416 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 18 | 439 | 422 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 126 | 423 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92470.1 | 0 | 18 | 439 | 113 | 528 | unknown [Populus trichocarpa] |
DDBJ | BAF42041.1 | 0 | 18 | 439 | 105 | 509 | pectin methylesterase 4 [Pyrus communis] |
EMBL | CBI29628.1 | 0 | 7 | 439 | 99 | 527 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | Q43062 | 0 | 18 | 439 | 117 | 522 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 18 | 439 | 105 | 520 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 123 | 437 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 123 | 437 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 1e-21 | 122 | 345 | 1 | 245 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 1e-21 | 122 | 345 | 1 | 245 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 1e-21 | 122 | 345 | 1 | 245 | A Chain A, Pectin Methylesterase From Carrot |