| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.001G034000.1 |
| Family | CBM57 |
| Protein Properties | Length: 651 Molecular Weight: 70998.5 Isoelectric Point: 5.7416 |
| Chromosome | Chromosome/Scaffold: 01 Start: 3128985 End: 3133068 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 404 | 572 | 1.5e-31 |
| SIKCGGTAQKSASGIEFDDDSEALGAAALYTSTDEQWAVSNAGNFISNPKGNRYVAMTDSQITETLESELYKTSRISPSSLRYYGLNLKNGKYSVELHFA EIEMEDSSSWNGLGRRLFDVYIQGEKVLEDFNIQKEAGGSKKALVKTFEANVTNAIMEIHFFWAGKGTC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 651 Download |
| MGLLSFTLLI LGLFQLVSAQ QNTDPNEVAA LRTLINYWNL GSKINLTIDP CNQNASWTSE 60 DSNPRVACDC SSNICHITHL KIYALDIKGE IPKELFELKE LMDLNLGQNV LNGSIPAEIG 120 QLSKMQYLSL GINNLTGAVP PELGNLSQLH SLSFSSNNFF GPLPKELGNL TSLQQLYIDS 180 SGVSGSIPEE FANLKSLQIL WASDNRLTGK LPEYFGTFTE FRDMRLQGTS VEGPIPSSFS 240 ALTKLEDLRI GDLRGEASSL DFLDSQTSLS TLSLRNCQLS GQIPERIGKF TNLKYLDLSF 300 NKLTGQIPTS FRGFSSLQFL YLGNNNLSGE LPEDIITPEL IALDVSFNPL SGNLPTQFAK 360 TKSINVVGTS INANGLQDNK VSGMLNCIQG KTKCKNKGSS TSFSIKCGGT AQKSASGIEF 420 DDDSEALGAA ALYTSTDEQW AVSNAGNFIS NPKGNRYVAM TDSQITETLE SELYKTSRIS 480 PSSLRYYGLN LKNGKYSVEL HFAEIEMEDS SSWNGLGRRL FDVYIQGEKV LEDFNIQKEA 540 GGSKKALVKT FEANVTNAIM EIHFFWAGKG TCCIPYQSTY GPLVSAIHAS QVSEAADASS 600 SRKHVGRIAG IVIGAVAGVV ILSSVFYLWW KKDPQGHMRI FTDSPRKPLK * 660 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN00113 | PLN00113 | 4.0e-31 | 80 | 387 | 309 | + leucine-rich repeat receptor-like protein kinase; Provisional |
| PLN00113 | PLN00113 | 9.0e-32 | 49 | 367 | 321 | + leucine-rich repeat receptor-like protein kinase; Provisional |
| PLN00113 | PLN00113 | 1.0e-34 | 82 | 355 | 280 | + leucine-rich repeat receptor-like protein kinase; Provisional |
| PLN00113 | PLN00113 | 6.0e-35 | 74 | 372 | 303 | + leucine-rich repeat receptor-like protein kinase; Provisional |
| pfam11721 | Malectin | 2.0e-54 | 401 | 587 | 189 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI21051.1 | 0 | 1 | 647 | 1 | 649 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002282711.1 | 0 | 1 | 647 | 157 | 791 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309634.1 | 0 | 15 | 591 | 15 | 465 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002324865.1 | 0 | 1 | 646 | 1 | 593 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515504.1 | 0 | 18 | 650 | 263 | 893 | ATP binding protein, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 7e-26 | 67 | 332 | 289 | 552 | A Chain A, Human Diphosphoinositol Polyphosphate Phosphohydrolase 1 |
| PDB | 3rj0_A | 2e-23 | 89 | 372 | 405 | 711 | A Chain A, Human Diphosphoinositol Polyphosphate Phosphohydrolase 1 |
| PDB | 3rj0_A | 1e-22 | 72 | 333 | 412 | 719 | A Chain A, Human Diphosphoinositol Polyphosphate Phosphohydrolase 1 |
| PDB | 3rj0_A | 1e-21 | 69 | 372 | 218 | 497 | A Chain A, Human Diphosphoinositol Polyphosphate Phosphohydrolase 1 |
| PDB | 3rj0_A | 0.0000000000008 | 25 | 236 | 456 | 718 | A Chain A, Human Diphosphoinositol Polyphosphate Phosphohydrolase 1 |
