y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.001G048300.1 |
Family | AA1 |
Protein Properties | Length: 586 Molecular Weight: 65719.6 Isoelectric Point: 6.9621 |
Chromosome | Chromosome/Scaffold: 01 Start: 4598996 End: 4602787 |
Description | SKU5 similar 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 42 | 510 | 0 |
RVIAVNGAFPGPVVNVTTNYNVNINVHNQLDENLLMTWPGIQMRRNSWQDGVLGTNCPIHPKKNFTYQFQVKDQIGSFFYFPSLNFQRASGGFGPIIINN RNIIAIPFAHPDADIVLLVGDWYTKNHTALRTTLESGEELGMPDGVLINGKGPYRYNSTLVPDGIEYEIINVDPGKTYRFRVHNVGTSTSLNFRIEGHNL LLVETEGFYTTQQNFTSFDIHVGQSYSFLVTMDQNATKDYYIVASARFVNETVWERVTGVAILHYSNSKGPASGPLPVAPSDIYNQWSAMNQPRAIRQNT TASGARPNPQGSFHYGSINVTDTYVIQSLPPVRIDGKFRATLNGISFVNPDTPIRLADLHKVKGAYKLDFPNKPHDRTPHMDRSVINATYKGFIEIILQN NDTKMQSFHMDGYAFFVVGMDFGVWSENSRNNYNKWDAISRSTTEVYPGGWTAVLVSLDNVGVWNLRVE |
Full Sequence |
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Protein Sequence Length: 586 Download |
MALLLLIHIA LFSTLCFAAD PSVFLDFKLS YITLSPLGVP QRVIAVNGAF PGPVVNVTTN 60 YNVNINVHNQ LDENLLMTWP GIQMRRNSWQ DGVLGTNCPI HPKKNFTYQF QVKDQIGSFF 120 YFPSLNFQRA SGGFGPIIIN NRNIIAIPFA HPDADIVLLV GDWYTKNHTA LRTTLESGEE 180 LGMPDGVLIN GKGPYRYNST LVPDGIEYEI INVDPGKTYR FRVHNVGTST SLNFRIEGHN 240 LLLVETEGFY TTQQNFTSFD IHVGQSYSFL VTMDQNATKD YYIVASARFV NETVWERVTG 300 VAILHYSNSK GPASGPLPVA PSDIYNQWSA MNQPRAIRQN TTASGARPNP QGSFHYGSIN 360 VTDTYVIQSL PPVRIDGKFR ATLNGISFVN PDTPIRLADL HKVKGAYKLD FPNKPHDRTP 420 HMDRSVINAT YKGFIEIILQ NNDTKMQSFH MDGYAFFVVG MDFGVWSENS RNNYNKWDAI 480 SRSTTEVYPG GWTAVLVSLD NVGVWNLRVE NLDRWYLGQE TYMRIINPEE NGKTEMVPPD 540 NVIYCGALQS LQKESQSSSA MALHCGNFKL FLTLAITILA LYFHF* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02792 | PLN02792 | 9.0e-180 | 19 | 546 | 535 | + oxidoreductase | ||
PLN02168 | PLN02168 | 2.0e-180 | 3 | 546 | 554 | + copper ion binding / pectinesterase | ||
PLN00044 | PLN00044 | 0 | 3 | 547 | 549 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 1 | 546 | 550 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 1 | 546 | 550 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_194254.2 | 0 | 5 | 567 | 11 | 572 | SKS1 (SKU5 SIMILAR 1); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_199961.1 | 0 | 15 | 585 | 20 | 591 | SKS2 (SKU5 SIMILAR 2); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002318885.1 | 0 | 5 | 582 | 13 | 590 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321832.1 | 0 | 2 | 585 | 10 | 594 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510943.1 | 0 | 4 | 585 | 9 | 591 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 27 | 551 | 8 | 545 | A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum |
PDB | 1asq_A | 0 | 27 | 551 | 8 | 545 | A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum |
PDB | 1asp_B | 0 | 27 | 551 | 8 | 545 | A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum |
PDB | 1asp_A | 0 | 27 | 551 | 8 | 545 | A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum |
PDB | 1aso_B | 0 | 27 | 551 | 8 | 545 | A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum |