Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.001G111200.1 |
Family | GT47 |
Protein Properties | Length: 622 Molecular Weight: 71509.4 Isoelectric Point: 7.7976 |
Chromosome | Chromosome/Scaffold: 01 Start: 12919333 End: 12921694 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 214 | 530 | 0 |
GRYIFVHDIPRKFNQDLLDNCQSLSSWTDICESALNLGLGPPSSFLLEVIFHNRMKQYQCLTNDPMVASAIYVPYYAGLDVGRYLWGPIGYRRDHDAMEL VKWLAGRPEWKNTWGRDHFLVAGRINWDFRRDLKNVSDWGNGLLTYPESKNMTMLVIESSPWNNIDFAIPYPTYFHPSRDDDVFQWQNRMRELKRRFLFS FGGARRPNRDECIRNEIIDQCLVSRKRCRFLECDQTQRCYKPENLMKLFQSSIFCLQPPGNSYTRRSIFDSILAGCVPVFFHPGSAYVQYLWHFPKDYTK YSVLIPASAVKSGEVNI |
Full Sequence |
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Protein Sequence Length: 622 Download |
MEKPINGKCP CRTQSWYIVL ISFLIWFSLF YLYSSSITFG KMGDSFLGNN RTGFVGSSES 60 SLHDVVKNET GNASYVNDVK IEDNKGKAID ETENDRKPIK FYIDRDIDID RLIALLMADD 120 NETETFETIS GKILEEEFKN VRDDLPTIKG RREAKSSKRR GRIKPVEAVA AATTIPKKVE 180 QVVPQPRTQN VVKPQEPKPQ NVVKPEPDPS PCLGRYIFVH DIPRKFNQDL LDNCQSLSSW 240 TDICESALNL GLGPPSSFLL EVIFHNRMKQ YQCLTNDPMV ASAIYVPYYA GLDVGRYLWG 300 PIGYRRDHDA MELVKWLAGR PEWKNTWGRD HFLVAGRINW DFRRDLKNVS DWGNGLLTYP 360 ESKNMTMLVI ESSPWNNIDF AIPYPTYFHP SRDDDVFQWQ NRMRELKRRF LFSFGGARRP 420 NRDECIRNEI IDQCLVSRKR CRFLECDQTQ RCYKPENLMK LFQSSIFCLQ PPGNSYTRRS 480 IFDSILAGCV PVFFHPGSAY VQYLWHFPKD YTKYSVLIPA SAVKSGEVNI EQLDEVIKLI 540 PNVIYADPAS RLQTIGDAFN LTVKGVLDRV ETIRNQMKDG KEVNSEFPEQ ESWKYLTFGK 600 LGGHEWDPFF SSKLGKLSDG N* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK04335 | PRK04335 | 0.004 | 135 | 209 | 75 | + cell division protein ZipA; Provisional | ||
pfam03016 | Exostosin | 5.0e-62 | 211 | 520 | 326 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN64889.1 | 0 | 59 | 593 | 131 | 710 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_180468.1 | 0 | 211 | 610 | 288 | 717 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002280815.1 | 0 | 167 | 610 | 50 | 521 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301846.1 | 0 | 155 | 621 | 72 | 562 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
RefSeq | XP_002313430.1 | 0 | 120 | 610 | 43 | 567 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |