Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.001G122300.2 |
Family | GH17 |
Protein Properties | Length: 363 Molecular Weight: 39757.4 Isoelectric Point: 5.8881 |
Chromosome | Chromosome/Scaffold: 01 Start: 15285802 End: 15288965 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 27 | 312 | 0 |
VGINYGQIANNLPSPSRVAYLLKSLNISRMKLYDADPNVLVTFSHTNVDFIIGLGNEYLPNMTDPIKARIWLQQRVQPHLPQTRITCITMGNEVFKTYDH QLWSNLPAMQTVYNALVDLGLDKQVTVTSAHSLDILSISFPPSAGSFRQDLSEYLHGILNFHAEPNQGTVDPITNLKYDNMLYAQVDAVYSAIKAMGHTD IKVQISETGWPSRGDDDEAGATPENAGLYNGNLLKRIEEKQSTPAKPNVPVNVYVFALFNENLKPGPASERNYGLYYPNGTPVYNI |
Full Sequence |
---|
Protein Sequence Length: 363 Download |
MSYMAASSLL LLLFFSGSPI QILGLGVGIN YGQIANNLPS PSRVAYLLKS LNISRMKLYD 60 ADPNVLVTFS HTNVDFIIGL GNEYLPNMTD PIKARIWLQQ RVQPHLPQTR ITCITMGNEV 120 FKTYDHQLWS NLPAMQTVYN ALVDLGLDKQ VTVTSAHSLD ILSISFPPSA GSFRQDLSEY 180 LHGILNFHAE PNQGTVDPIT NLKYDNMLYA QVDAVYSAIK AMGHTDIKVQ ISETGWPSRG 240 DDDEAGATPE NAGLYNGNLL KRIEEKQSTP AKPNVPVNVY VFALFNENLK PGPASERNYG 300 LYYPNGTPVY NIGVQGYLPG MVYTSPSTKI ALSVVSNVLF IVIAYLISAG KLVDLKMEGS 360 SD* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0004 | 18 | 305 | 308 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-74 | 27 | 312 | 315 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU21124.1 | 0 | 20 | 341 | 30 | 386 | unknown [Glycine max] |
RefSeq | NP_565652.1 | 0 | 21 | 347 | 23 | 382 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_973548.1 | 0 | 21 | 341 | 23 | 375 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002328249.1 | 0 | 20 | 333 | 22 | 366 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 21 | 337 | 7 | 353 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 27 | 312 | 3 | 312 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3ur8_A | 0 | 27 | 312 | 3 | 312 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3ur7_B | 0 | 27 | 312 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 27 | 312 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3f55_D | 0 | 27 | 312 | 2 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |