Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.001G122300.3 |
Family | GH17 |
Protein Properties | Length: 393 Molecular Weight: 43305.5 Isoelectric Point: 5.604 |
Chromosome | Chromosome/Scaffold: 01 Start: 15285869 End: 15288791 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 27 | 342 | 0 |
VGINYGQIANNLPSPSRVAYLLKSLNISRMKLYDADPNVLVTFSHTNVDFIIGLGNEYLPNMTDPIKARIWLQQRVQPHLPQTRITCITMGNEVFKTYDH QLWSNLPAMQTVYNALVDLGLDKQVTVTSAHSLDILSISFPPSAGSFRQDLSEYLHGILNFHAEVKSPFLINAYPYFAYKDNPNEVPLDYVLFQPNQGTV DPITNLKYDNMLYAQVDAVYSAIKAMGHTDIKVQISETGWPSRGDDDEAGATPENAGLYNGNLLKRIEEKQSTPAKPNVPVNVYVFALFNENLKPGPASE RNYGLYYPNGTPVYNI |
Full Sequence |
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Protein Sequence Length: 393 Download |
MSYMAASSLL LLLFFSGSPI QILGLGVGIN YGQIANNLPS PSRVAYLLKS LNISRMKLYD 60 ADPNVLVTFS HTNVDFIIGL GNEYLPNMTD PIKARIWLQQ RVQPHLPQTR ITCITMGNEV 120 FKTYDHQLWS NLPAMQTVYN ALVDLGLDKQ VTVTSAHSLD ILSISFPPSA GSFRQDLSEY 180 LHGILNFHAE VKSPFLINAY PYFAYKDNPN EVPLDYVLFQ PNQGTVDPIT NLKYDNMLYA 240 QVDAVYSAIK AMGHTDIKVQ ISETGWPSRG DDDEAGATPE NAGLYNGNLL KRIEEKQSTP 300 AKPNVPVNVY VFALFNENLK PGPASERNYG LYYPNGTPVY NIGVQGYLPG MVYTSPSTKI 360 ALSVVSNVLF IVIAYLISAG KLVDLKMEGS SD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 187 | 335 | 152 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 9.0e-94 | 27 | 342 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU21124.1 | 0 | 20 | 371 | 30 | 386 | unknown [Glycine max] |
RefSeq | NP_565652.1 | 0 | 21 | 377 | 23 | 382 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_973548.1 | 0 | 21 | 371 | 23 | 375 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002328249.1 | 0 | 20 | 363 | 22 | 366 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 21 | 367 | 7 | 353 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 27 | 342 | 2 | 313 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 3f55_C | 0 | 27 | 342 | 2 | 313 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 3f55_B | 0 | 27 | 342 | 2 | 313 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 3f55_A | 0 | 27 | 342 | 2 | 313 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 3em5_D | 0 | 27 | 342 | 2 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |