Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.001G127600.1 |
Family | GH3 |
Protein Properties | Length: 370 Molecular Weight: 40684 Isoelectric Point: 8.5537 |
Chromosome | Chromosome/Scaffold: 01 Start: 16150537 End: 16157256 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 3 | 104 | 4.7e-21 |
VAACAKHFWGDGGTTKGINENNTVISLNGLLSIHMPAYLNSIRKGMHANRDLVIGFLKNKLKFRGFVISDWLGINKITSPPHANYSYSVEAEVGAGIDMI MV |
Full Sequence |
---|
Protein Sequence Length: 370 Download |
KKVAACAKHF WGDGGTTKGI NENNTVISLN GLLSIHMPAY LNSIRKGMHA NRDLVIGFLK 60 NKLKFRGFVI SDWLGINKIT SPPHANYSYS VEAEVGAGID MIMVSNFTEF IDFLTYQVKH 120 NIIPMSRIDD AVKRILRVEF EHRELAREVM RKTLVLLKNG ESTDKPLLPL PKKATKILVS 180 GTHADNLGYQ CGGWTITWQG LGGNDLTSGT TTLQAIKNTV DLTTRVVYSE NPDSDFVKSI 240 KFSFAIVVVG EPLYAETFGD SLNLTLSEPG PRTIYNVCGA VKCVVVVISG WPVVMQPYLS 300 SVNALVVAWL PETEGKGVAD VLFGDYGFTG KLVRTWFKTV DQLPMNIGDP HYYPLFPFGF 360 GLTTKPTEG* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 4.0e-11 | 303 | 363 | 83 | + beta-D-glucoside glucohydrolase; Provisional | ||
PRK15098 | PRK15098 | 2.0e-12 | 3 | 229 | 272 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 7.0e-28 | 1 | 197 | 228 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-33 | 1 | 138 | 154 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-36 | 154 | 363 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 2 | 368 | 223 | 626 | beta-D-glucosidase [Gossypium hirsutum] |
GenBank | ABK95015.1 | 0 | 2 | 368 | 221 | 624 | unknown [Populus trichocarpa] |
RefSeq | XP_002313632.1 | 0 | 2 | 368 | 222 | 626 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 2 | 368 | 208 | 611 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523935.1 | 0 | 2 | 368 | 228 | 631 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 2 | 368 | 200 | 603 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 1iex_A | 0 | 2 | 368 | 200 | 603 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 1iew_A | 0 | 2 | 368 | 200 | 603 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 1iev_A | 0 | 2 | 368 | 200 | 603 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 1ieq_A | 0 | 2 | 368 | 200 | 603 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DW479507 | 297 | 93 | 367 | 0 |
DW500162 | 318 | 61 | 356 | 0 |
JK801769 | 258 | 123 | 359 | 0 |
FE682210 | 290 | 59 | 326 | 0 |
DT744456 | 286 | 48 | 311 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|