Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.001G140500.1 |
Family | CE8 |
Protein Properties | Length: 562 Molecular Weight: 61638.1 Isoelectric Point: 9.4643 |
Chromosome | Chromosome/Scaffold: 01 Start: 19012205 End: 19016606 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 249 | 544 | 0 |
LIVAKDGTGNFTNITDAVSAAPNNSDTRFVIYIKAGAYFENVEVDRKKTMLMFVGDGIGKTVVKASRNVVDGFTTFRSATVAVVGNGFIAKGITIENSAG PSKHQAVALRSGSDLSAFYKCSFVAYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQACNLYARKPNPNQKNIFTAQGREDPNQNTGISILNSKIAA AADLIPLKSSFKTYLGRPWKEFSRTVIMRSYIDDSVDPAGWLEWNGTFALSTLYYGEYLNRGAGSNTSARVTWPGYRVINSSTEADQFTAGAFIQG |
Full Sequence |
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Protein Sequence Length: 562 Download |
MHNPRVSFRA FLLLFPISAF VLVLLSSAVI LKKSPKTTQI GHFHVHNHLQ RASSACDGTL 60 YPELCVSTIS VLPDLASKSL PELISATLNQ TMHEVRLSSA NITNIEKKLK SYNTLEEAAI 120 NDCLELFDNT MAELKVVRSG LGPKGSSVSE NYHDLQTFLS AAMTNQQTCL DGFARSSGNV 180 RSIIKKGLHN ISHHVSNSLV MLNKVPGVNK SKPEVFPGYG RVKNGFPTWL SRRDRKLLQA 240 SLNETKFDLI VAKDGTGNFT NITDAVSAAP NNSDTRFVIY IKAGAYFENV EVDRKKTMLM 300 FVGDGIGKTV VKASRNVVDG FTTFRSATVA VVGNGFIAKG ITIENSAGPS KHQAVALRSG 360 SDLSAFYKCS FVAYQDTLYV HSLRQFYREC DIYGTVDFIF GNAAAVFQAC NLYARKPNPN 420 QKNIFTAQGR EDPNQNTGIS ILNSKIAAAA DLIPLKSSFK TYLGRPWKEF SRTVIMRSYI 480 DDSVDPAGWL EWNGTFALST LYYGEYLNRG AGSNTSARVT WPGYRVINSS TEADQFTAGA 540 FIQGNDWLNS TDIPFSLGLI L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02933 | PLN02933 | 0 | 77 | 559 | 492 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 248 | 545 | 298 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 22 | 559 | 542 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 9 | 559 | 569 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 10 | 560 | 582 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACQ85264.1 | 0 | 43 | 559 | 46 | 564 | pectin methylesterase [Musa acuminata AAA Group] |
EMBL | CBI36883.1 | 0 | 5 | 534 | 14 | 499 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271665.1 | 0 | 1 | 555 | 1 | 559 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301486.1 | 0 | 115 | 559 | 6 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523113.1 | 0 | 37 | 559 | 34 | 556 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 248 | 559 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 250 | 559 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 9e-23 | 245 | 467 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 9e-23 | 245 | 467 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 9e-23 | 245 | 467 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |