| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.001G179800.1 |
| Family | AA3 |
| Protein Properties | Length: 750 Molecular Weight: 82136 Isoelectric Point: 7.2088 |
| Chromosome | Chromosome/Scaffold: 01 Start: 27564007 End: 27568110 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 234 | 748 | 1.12104e-44 |
| DHNVFNIKCDVVIVGSGCGGGVAAAVLASSGQKVVVIEKGNYFATTDYTSLEGPSMSELYEYGGFLTTTNGKFMIMAGSTVGGGSAINWSASIKTPNNVL KEWSLDHKIPLFGSSEYENAMDAVYQRLGVTENCTEEGLQNQVLRKGCENLGLKVEAVPRNSPEDHYCGSCNLGCRTGDKKGTATTWLVDAQGYGAVILT ACKADRLMLVNNNEDARRRKKCLGVVATSLNKNLTKKLQFEAKTTISACGSLLTPPLMISSGLKNPNIGRNLHLHPALVAWGYFPEDETGIKGKSYEGGI ITSFNRIVSEESNNVHAIIQAPALGPASFAAISPWVSGRELKERMVRYPRLAHLFTLIRDQGSGEVMEEGKIKYRLSEVDKENLKIGLRQVLRVLIAAGA VEVGTHRSDGQRIKCKGLTEESLQEFLDNVPVVGGLSSKDEYWTLYLTAHQIGSCRMGATEEEGAVDENGQSWEAEGLFVCDASVLPTAIGVNPMITIQS TSYCISNKIAQLLKK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 750 Download |
| MEIGNHETGD AHPLLRGGRR KTTYTHGFSS AQIQSLAAIC EALIPPLPLD SAHQASSLDA 60 FYKASGAEPP LPDEVAEMMV KRVVEPRVLS FVKVVLTVIS FRLGALLLCG WDCCDWKWPF 120 IHKFSELPVE RREKILMKWS SNGHHRLPLR AVFALIKTYC LFIFFSMLLK FVSQTDEKSE 180 NPSWKAIGYN VDKRQKRVSS PHGRKGIIET MHEDDSTFVQ SLTEKGLQVT EDPDHNVFNI 240 KCDVVIVGSG CGGGVAAAVL ASSGQKVVVI EKGNYFATTD YTSLEGPSMS ELYEYGGFLT 300 TTNGKFMIMA GSTVGGGSAI NWSASIKTPN NVLKEWSLDH KIPLFGSSEY ENAMDAVYQR 360 LGVTENCTEE GLQNQVLRKG CENLGLKVEA VPRNSPEDHY CGSCNLGCRT GDKKGTATTW 420 LVDAQGYGAV ILTACKADRL MLVNNNEDAR RRKKCLGVVA TSLNKNLTKK LQFEAKTTIS 480 ACGSLLTPPL MISSGLKNPN IGRNLHLHPA LVAWGYFPED ETGIKGKSYE GGIITSFNRI 540 VSEESNNVHA IIQAPALGPA SFAAISPWVS GRELKERMVR YPRLAHLFTL IRDQGSGEVM 600 EEGKIKYRLS EVDKENLKIG LRQVLRVLIA AGAVEVGTHR SDGQRIKCKG LTEESLQEFL 660 DNVPVVGGLS SKDEYWTLYL TAHQIGSCRM GATEEEGAVD ENGQSWEAEG LFVCDASVLP 720 TAIGVNPMIT IQSTSYCISN KIAQLLKKE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.002 | 683 | 731 | 50 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| PRK02106 | PRK02106 | 0.0008 | 681 | 743 | 64 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 1.0e-20 | 605 | 732 | 128 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 7.0e-22 | 311 | 749 | 495 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 1.0e-83 | 289 | 510 | 225 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22878.1 | 0 | 24 | 748 | 1 | 718 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 10 | 748 | 4 | 737 | hypothetical protein [Vitis vinifera] |
| EMBL | CAP15763.1 | 0 | 6 | 749 | 4 | 749 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
| RefSeq | XP_002285334.1 | 0 | 10 | 748 | 4 | 737 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002529832.1 | 0 | 12 | 748 | 8 | 743 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.00001 | 241 | 721 | 17 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 2jbv_B | 0.0006 | 430 | 747 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| PDB | 2jbv_A | 0.0006 | 430 | 747 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| PDB | 3nne_H | 0.0006 | 430 | 747 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.0006 | 430 | 747 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
