| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.001G179800.3 |
| Family | AA3 |
| Protein Properties | Length: 666 Molecular Weight: 73182.9 Isoelectric Point: 7.7233 |
| Chromosome | Chromosome/Scaffold: 01 Start: 27564007 End: 27568110 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 150 | 664 | 7.00649e-45 |
| DHNVFNIKCDVVIVGSGCGGGVAAAVLASSGQKVVVIEKGNYFATTDYTSLEGPSMSELYEYGGFLTTTNGKFMIMAGSTVGGGSAINWSASIKTPNNVL KEWSLDHKIPLFGSSEYENAMDAVYQRLGVTENCTEEGLQNQVLRKGCENLGLKVEAVPRNSPEDHYCGSCNLGCRTGDKKGTATTWLVDAQGYGAVILT ACKADRLMLVNNNEDARRRKKCLGVVATSLNKNLTKKLQFEAKTTISACGSLLTPPLMISSGLKNPNIGRNLHLHPALVAWGYFPEDETGIKGKSYEGGI ITSFNRIVSEESNNVHAIIQAPALGPASFAAISPWVSGRELKERMVRYPRLAHLFTLIRDQGSGEVMEEGKIKYRLSEVDKENLKIGLRQVLRVLIAAGA VEVGTHRSDGQRIKCKGLTEESLQEFLDNVPVVGGLSSKDEYWTLYLTAHQIGSCRMGATEEEGAVDENGQSWEAEGLFVCDASVLPTAIGVNPMITIQS TSYCISNKIAQLLKK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 666 Download |
| MMVKRVVEPR VLSFVKVVLT VISFRLGALL LCGWDCCDWK WPFIHKFSEL PVERREKILM 60 KWSSNGHHRL PLRAVFALIK TYCLFIFFSM TDEKSENPSW KAIGYNVDKR QKRVSSPHGR 120 KGIIETMHED DSTFVQSLTE KGLQVTEDPD HNVFNIKCDV VIVGSGCGGG VAAAVLASSG 180 QKVVVIEKGN YFATTDYTSL EGPSMSELYE YGGFLTTTNG KFMIMAGSTV GGGSAINWSA 240 SIKTPNNVLK EWSLDHKIPL FGSSEYENAM DAVYQRLGVT ENCTEEGLQN QVLRKGCENL 300 GLKVEAVPRN SPEDHYCGSC NLGCRTGDKK GTATTWLVDA QGYGAVILTA CKADRLMLVN 360 NNEDARRRKK CLGVVATSLN KNLTKKLQFE AKTTISACGS LLTPPLMISS GLKNPNIGRN 420 LHLHPALVAW GYFPEDETGI KGKSYEGGII TSFNRIVSEE SNNVHAIIQA PALGPASFAA 480 ISPWVSGREL KERMVRYPRL AHLFTLIRDQ GSGEVMEEGK IKYRLSEVDK ENLKIGLRQV 540 LRVLIAAGAV EVGTHRSDGQ RIKCKGLTEE SLQEFLDNVP VVGGLSSKDE YWTLYLTAHQ 600 IGSCRMGATE EEGAVDENGQ SWEAEGLFVC DASVLPTAIG VNPMITIQST SYCISNKIAQ 660 LLKKE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.001 | 599 | 647 | 50 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| PRK02106 | PRK02106 | 0.0006 | 597 | 659 | 64 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 4.0e-21 | 521 | 648 | 128 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 2.0e-22 | 227 | 665 | 496 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 5.0e-84 | 205 | 426 | 225 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22878.1 | 0 | 1 | 664 | 56 | 718 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 1 | 664 | 74 | 737 | hypothetical protein [Vitis vinifera] |
| EMBL | CAP15763.1 | 0 | 9 | 665 | 90 | 749 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
| RefSeq | XP_002285334.1 | 0 | 1 | 664 | 74 | 737 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002529832.1 | 0 | 1 | 664 | 81 | 743 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.00002 | 157 | 636 | 17 | 498 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 2jbv_B | 0.0005 | 346 | 663 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| PDB | 2jbv_A | 0.0005 | 346 | 663 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| PDB | 3nne_H | 0.0006 | 346 | 663 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.0006 | 346 | 663 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
