| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.001G189500.4 |
| Family | GT47 |
| Protein Properties | Length: 435 Molecular Weight: 50234 Isoelectric Point: 9.6567 |
| Chromosome | Chromosome/Scaffold: 01 Start: 31040795 End: 31043029 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 99 | 381 | 0 |
| EKVFKIYVYKEGEPPIFHNGPCRSIYSSEGRFIHELEKGNFYTTEDPDEALVYFLPFSVVMLVQYLYEPETSNTDAIGRTVVDYIDVISGKYPYWNRSLG ADHFMLSCHDWGPRTSSYVPHLFHKSIRVLCNANTSEGFNPSKDASFPEINLLTGEVEGLLGGPSPSHRSILAFFAGRLHGYIRYLLLNEWKDKRDPDVQ VFDQLPKGVSYMSKLKNSRFCLCPSGYEVASPRIVEAIYAECVPVLISDNYVPPFSDVLNWKSFSIQIAVKDIPNIKKILMGV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 435 Download |
| MAPPLILLSS WKLKLIILSL ICPFRMQLLR NTRFNLSKIV KKNSKLERNE ANLARVRSSI 60 KQAALVRNLT STHQDPDYVP HGPIYRNANA FHRSYLEMEK VFKIYVYKEG EPPIFHNGPC 120 RSIYSSEGRF IHELEKGNFY TTEDPDEALV YFLPFSVVML VQYLYEPETS NTDAIGRTVV 180 DYIDVISGKY PYWNRSLGAD HFMLSCHDWG PRTSSYVPHL FHKSIRVLCN ANTSEGFNPS 240 KDASFPEINL LTGEVEGLLG GPSPSHRSIL AFFAGRLHGY IRYLLLNEWK DKRDPDVQVF 300 DQLPKGVSYM SKLKNSRFCL CPSGYEVASP RIVEAIYAEC VPVLISDNYV PPFSDVLNWK 360 SFSIQIAVKD IPNIKKILMG VSQRQYLRMQ RRVKQVQRHF VVNATPKRYD VFHMINHSIW 420 LRRLNIHVRD FHQS* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam03016 | Exostosin | 1.0e-60 | 98 | 381 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAU04753.1 | 0 | 93 | 430 | 7 | 343 | EXO [Cucumis melo] |
| EMBL | CBI28483.1 | 0 | 68 | 430 | 55 | 416 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264076.1 | 0 | 98 | 430 | 1 | 332 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002320538.1 | 0 | 98 | 430 | 1 | 332 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524591.1 | 0 | 38 | 431 | 113 | 505 | catalytic, putative [Ricinus communis] |
