| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.001G218100.2 |
| Family | GT19 |
| Protein Properties | Length: 383 Molecular Weight: 42934.5 Isoelectric Point: 9.787 |
| Chromosome | Chromosome/Scaffold: 01 Start: 43954755 End: 43958983 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 30 | 342 | 0 |
| VKLKETVEAALQFQPHVVVTVDSKGFSFRLLKQLRARYNQQRSDRPVLFHYVAPSFWAWKGGEARLKGLSKFVDYVFCILPNEEAGCKLNGLNATFVGHP ILEDVLELNMGKETALHEWKITGNGEDFRKKYAIASGATVITLLPGSRLQEVTRMLPIFSNTMKLLKDSFPELVTVIHVAPNQLVDNYIAKAVHKWPVPA ILIPGGTPQLKYDAFNASLVALCTSGTVAMELQLARLPCLVTYRAHFLTEWFVRHKAKIPYISLPNILLDSPVIPEALFQACTPAKVAFLLKELMNNTVL QQQQIAAAEKVME | |||
| Full Sequence |
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| Protein Sequence Length: 383 Download |
| MNLEDSLKKK KKKLCTKLLM DHLYLMKCQV KLKETVEAAL QFQPHVVVTV DSKGFSFRLL 60 KQLRARYNQQ RSDRPVLFHY VAPSFWAWKG GEARLKGLSK FVDYVFCILP NEEAGCKLNG 120 LNATFVGHPI LEDVLELNMG KETALHEWKI TGNGEDFRKK YAIASGATVI TLLPGSRLQE 180 VTRMLPIFSN TMKLLKDSFP ELVTVIHVAP NQLVDNYIAK AVHKWPVPAI LIPGGTPQLK 240 YDAFNASLVA LCTSGTVAME LQLARLPCLV TYRAHFLTEW FVRHKAKIPY ISLPNILLDS 300 PVIPEALFQA CTPAKVAFLL KELMNNTVLQ QQQIAAAEKV MELLCPPNRT LNNTEQQGMK 360 PSPPSYSPSM IAASTILSYK QR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14089 | PRK14089 | 1.0e-19 | 33 | 299 | 273 | + ipid-A-disaccharide synthase; Provisional | ||
| TIGR00215 | lpxB | 1.0e-34 | 33 | 326 | 296 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 4.0e-43 | 33 | 344 | 314 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 6.0e-67 | 33 | 335 | 305 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 3.0e-70 | 33 | 344 | 329 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 24 | 381 | 73 | 430 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC71491.1 | 0 | 19 | 377 | 106 | 463 | hypothetical protein OsI_03760 [Oryza sativa Indica Group] |
| RefSeq | NP_178535.2 | 0 | 19 | 382 | 102 | 455 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 19 | 382 | 81 | 443 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 24 | 379 | 111 | 466 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DC601543 | 205 | 89 | 293 | 0 |
| JG864023 | 279 | 43 | 321 | 0 |
| EX686418 | 259 | 121 | 379 | 0 |
| EL933823 | 234 | 116 | 349 | 0 |
| EY717263 | 252 | 20 | 271 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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