| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.001G218100.5 |
| Family | GT19 |
| Protein Properties | Length: 467 Molecular Weight: 52174.1 Isoelectric Point: 9.9937 |
| Chromosome | Chromosome/Scaffold: 01 Start: 43954758 End: 43958979 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT19 | 45 | 426 | 0 |
| VFIVAGEVSGDSIASRLMASLNKISPLPIRFSGVGGSRMSNQGLKSLFPMENIAVMGIWELLPHFYNFRVKLKETVEAALQFQPHVVVTVDSKGFSFRLL KQLRARYNQQRSDRPVLFHYVAPSFWAWKGGEARLKGLSKFVDYVFCILPNEEAGCKLNGLNATFVGHPILEDVLELNMGKETALHEWKITGNGEDFRKK YAIASGATVITLLPGSRLQEVTRMLPIFSNTMKLLKDSFPELVTVIHVAPNQLVDNYIAKAVHKWPVPAILIPGGTPQLKYDAFNASLVALCTSGTVAME LQLARLPCLVTYRAHFLTEWFVRHKAKIPYISLPNILLDSPVIPEALFQACTPAKVAFLLKELMNNTVLQQQQIAAAEKVME | |||
| Full Sequence |
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| Protein Sequence Length: 467 Download |
| MWLAAIRFVN IFKNSICWKT PLRRYLWVSS KSLIDRAASE GELRVFIVAG EVSGDSIASR 60 LMASLNKISP LPIRFSGVGG SRMSNQGLKS LFPMENIAVM GIWELLPHFY NFRVKLKETV 120 EAALQFQPHV VVTVDSKGFS FRLLKQLRAR YNQQRSDRPV LFHYVAPSFW AWKGGEARLK 180 GLSKFVDYVF CILPNEEAGC KLNGLNATFV GHPILEDVLE LNMGKETALH EWKITGNGED 240 FRKKYAIASG ATVITLLPGS RLQEVTRMLP IFSNTMKLLK DSFPELVTVI HVAPNQLVDN 300 YIAKAVHKWP VPAILIPGGT PQLKYDAFNA SLVALCTSGT VAMELQLARL PCLVTYRAHF 360 LTEWFVRHKA KIPYISLPNI LLDSPVIPEA LFQACTPAKV AFLLKELMNN TVLQQQQIAA 420 AEKVMELLCP PNRTLNNTEQ QGMKPSPPSY SPSMIAASTI LSYKQR* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 2.0e-35 | 46 | 428 | 396 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 8.0e-48 | 45 | 410 | 368 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 2.0e-64 | 45 | 428 | 386 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 2.0e-93 | 43 | 419 | 379 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 1.0e-100 | 43 | 428 | 403 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 37 | 465 | 2 | 430 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC71491.1 | 0 | 29 | 461 | 30 | 463 | hypothetical protein OsI_03760 [Oryza sativa Indica Group] |
| RefSeq | NP_178535.2 | 0 | 23 | 466 | 19 | 455 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 28 | 466 | 4 | 443 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 5 | 463 | 5 | 466 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EY717263 | 275 | 81 | 355 | 0 |
| EE622357 | 258 | 92 | 349 | 0 |
| FY429474 | 276 | 2 | 273 | 0 |
| DC601543 | 205 | 173 | 377 | 0 |
| EY717263 | 44 | 340 | 383 | 0.000003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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