Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G009200.3 |
Family | CE6 |
Protein Properties | Length: 195 Molecular Weight: 21516.4 Isoelectric Point: 6.8447 |
Chromosome | Chromosome/Scaffold: 02 Start: 598824 End: 601692 |
Description | Domain of unknown function (DUF303) |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE6 | 84 | 181 | 1.7e-29 |
GPGMSFANAVKDHLGGGGECLGLVPCAVGGTAIKEWERGQHLYDNMLKRSKESVEKTKGEIKALLWYQGESDTPSYHTAEAYKENMERLIHNVREDLG |
Full Sequence |
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Protein Sequence Length: 195 Download |
MEETKIPVTE QNQFPQTPKH IFILSGQSNM AGRGGVHHHH WDGVVPLDSQ PHASIIRLSA 60 NLHWEPAREP LHHDIDVRKA CGVGPGMSFA NAVKDHLGGG GECLGLVPCA VGGTAIKEWE 120 RGQHLYDNML KRSKESVEKT KGEIKALLWY QGESDTPSYH TAEAYKENME RLIHNVREDL 180 GLPSLPIIQL QKTG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02870 | spore_II_D | 0.009 | 125 | 170 | 47 | + stage II sporulation protein D. Stage II sporulation protein D (SpoIID) is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIID, along with SpoIIM and SpoIIP, is one of three major proteins involved in engulfment of the forespore by the mother cell [Cellular processes, Sporulation and germination]. | ||
pfam03629 | DUF303 | 4.0e-25 | 20 | 191 | 212 | + Domain of unknown function (DUF303). Distribution of this domain seems limited to prokaryotes and viruses. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM65927.1 | 0 | 13 | 190 | 16 | 198 | unknown [Arabidopsis thaliana] |
RefSeq | XP_002282529.1 | 0 | 6 | 190 | 755 | 935 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300236.1 | 0 | 19 | 193 | 1 | 178 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313872.1 | 0 | 13 | 191 | 3 | 183 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518686.1 | 0 | 10 | 193 | 2 | 195 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2apj_D | 0 | 13 | 190 | 16 | 198 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
PDB | 2apj_C | 0 | 13 | 190 | 16 | 198 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
PDB | 2apj_B | 0 | 13 | 190 | 16 | 198 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
PDB | 2apj_A | 0 | 13 | 190 | 16 | 198 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
PDB | 1zmb_F | 2e-20 | 22 | 188 | 5 | 154 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES840453 | 190 | 1 | 190 | 0 |
DT566443 | 190 | 1 | 190 | 0 |
DT543974 | 187 | 1 | 187 | 0 |
CO106256 | 190 | 1 | 190 | 0 |
AI728056 | 176 | 1 | 176 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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