y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G046400.5 |
Family | GT20 |
Protein Properties | Length: 775 Molecular Weight: 87454.6 Isoelectric Point: 6.9053 |
Chromosome | Chromosome/Scaffold: 02 Start: 3862409 End: 3872716 |
Description | trehalose-6-phosphate synthase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 4 | 400 | 0 |
CIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNMHYEEGDVVWCHDYHLMYLPECLKNHNNNMKVGWFLH TPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGIEGTPEGVEDQGRLTRVAAFPIGIDSLRFQNALLVPQVQEHIKELKERFSGR KVMLGVDRLDMIKGIPQKILAFEKFLEENPNWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFHALCALYAVTDVA LVTSLRDGMNLVSYEFVACQEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMSAEEREKRHQHNFHHVTKHTAQEWAEMFVSELN |
Full Sequence |
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Protein Sequence Length: 775 Download |
MQWCIPVFLD EEIVHQYYNG YCNNILWPLF HYLGLPQEDR LATTRSFQSQ FAAYKKANQM 60 FADVVNMHYE EGDVVWCHDY HLMYLPECLK NHNNNMKVGW FLHTPFPSSE IHRTLPSRSE 120 LLRSVLAADL VGFHTYDYAR HFVSACTRIL GIEGTPEGVE DQGRLTRVAA FPIGIDSLRF 180 QNALLVPQVQ EHIKELKERF SGRKVMLGVD RLDMIKGIPQ KILAFEKFLE ENPNWRDKVV 240 LLQIAVPTRT DVPEYQKLTS QVHEIVGRIN GRFGSLTAVP IHHLDRSLDF HALCALYAVT 300 DVALVTSLRD GMNLVSYEFV ACQEAKKGVL ILSEFAGAAQ SLGAGAILVN PWNITEVAAS 360 IAQALNMSAE EREKRHQHNF HHVTKHTAQE WAEMFVSELN DTVVEAQLRT SKEPPELPQN 420 DAVERYLLSG NRLLILGFNS TLTEPVDTSG NRSDQIREKN PNLHPELKEH LTALCNDKKT 480 TIVVLSGSKS EVLDKNFAEY DMWLAAENGM FLRHTKGDWM TTMPEHLNME WVDSLKHVFE 540 YFTERTPRSE FEIRTTSLVW NYKYADVEFG RLQARDMLQH LWTGPISNAS VDVVQGSRSV 600 EVRPVGVTKG AAIDRILGEI VHNTSMTTPI DYVLCVGHFL GKDEDVYTFF EPELPSDVNM 660 AKCKPIDAPK LPTEKKAPSK LPATKSGPKS SQTKTPKPSP APDKRTGNNH SGGSSRRASP 720 EKVKEKEKMA WSVLDLKGDN YFSCAVGRKR TSARYLLGSS DDVVSFLSRL AKGT* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03064 | PLN03064 | 0 | 4 | 774 | 773 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN03063 | PLN03063 | 0 | 4 | 771 | 768 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
TIGR02400 | trehalose_OtsA | 0 | 4 | 401 | 398 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. | ||
pfam00982 | Glyco_transf_20 | 0 | 4 | 401 | 400 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
PRK14501 | PRK14501 | 0 | 4 | 617 | 617 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA69879.1 | 0 | 4 | 774 | 162 | 939 | trehalose-6-phosphate synthase [Arabidopsis thaliana] |
RefSeq | NP_177979.1 | 0 | 4 | 774 | 162 | 939 | ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002285632.1 | 0 | 4 | 771 | 157 | 921 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331300.1 | 0 | 4 | 774 | 157 | 921 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531237.1 | 0 | 4 | 771 | 160 | 920 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wtx_D | 0 | 9 | 409 | 68 | 464 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_C | 0 | 9 | 409 | 68 | 464 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_B | 0 | 9 | 409 | 68 | 464 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_A | 0 | 9 | 409 | 68 | 464 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 1gz5_D | 0 | 9 | 403 | 67 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES813375 | 393 | 296 | 687 | 0 |
ES812747 | 326 | 290 | 613 | 0 |
ES848514 | 286 | 218 | 503 | 0 |
DW069910 | 288 | 21 | 308 | 0 |
CO078617 | 255 | 437 | 691 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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