Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G092400.1 |
Family | GH9 |
Protein Properties | Length: 523 Molecular Weight: 59369.9 Isoelectric Point: 6.3499 |
Chromosome | Chromosome/Scaffold: 02 Start: 11724509 End: 11727062 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 38 | 502 | 0 |
NYGKALSKSLLYFESQRSGRLPYNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVLEYGDEISSAGEYTHALEAIKWGTDYF IKAHTHPNVLWVEVGDGDTDHYCWQRPEDMTTSRQAYKVDEKNPGSDVAGETAAAMAAASIVFRKTNPHYSHLLLQHAEQLFEFGDKFRGKYDESVRVVK GYYPSVSGFKDELLWAALWLYKATDKEDYLSYALEKANEFGGITWAITEFSWDVKFPALQIIASMLLTEENHREMGFKLVFEQYRSKAEYYLCACLNKNN GSNVNRTPAGLLYIRQWNNMQYVSNAAFLLTVYSDYLRASNQRLRCDRGKVGPEEVLLFARSQADYILGANPMGMSYLVGYGSRYPQRMHHRGASIESYR ENKGFIGCTQGYDYWYPRNDPNPNVVVGALVGGPDHMDRFSDDRKNFMQTEACTYNTASLVGVLA |
Full Sequence |
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Protein Sequence Length: 523 Download |
MEEKRRCFSL SQNKFLQHWC VILFISSLAI LPLTQSFNYG KALSKSLLYF ESQRSGRLPY 60 NQRVTWRHHS GLTDGLEQGV DLVGGYYDAG DNVKFGLPMA FTITMLSWGV LEYGDEISSA 120 GEYTHALEAI KWGTDYFIKA HTHPNVLWVE VGDGDTDHYC WQRPEDMTTS RQAYKVDEKN 180 PGSDVAGETA AAMAAASIVF RKTNPHYSHL LLQHAEQLFE FGDKFRGKYD ESVRVVKGYY 240 PSVSGFKDEL LWAALWLYKA TDKEDYLSYA LEKANEFGGI TWAITEFSWD VKFPALQIIA 300 SMLLTEENHR EMGFKLVFEQ YRSKAEYYLC ACLNKNNGSN VNRTPAGLLY IRQWNNMQYV 360 SNAAFLLTVY SDYLRASNQR LRCDRGKVGP EEVLLFARSQ ADYILGANPM GMSYLVGYGS 420 RYPQRMHHRG ASIESYRENK GFIGCTQGYD YWYPRNDPNP NVVVGALVGG PDHMDRFSDD 480 RKNFMQTEAC TYNTASLVGV LAKLHGVEEE DGYLNTPLLA SS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02420 | PLN02420 | 0 | 20 | 521 | 514 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 38 | 506 | 469 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 20 | 513 | 494 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 38 | 502 | 467 | + Glycosyl hydrolase family 9. | ||
PLN00119 | PLN00119 | 0 | 20 | 504 | 488 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81074.1 | 0 | 17 | 521 | 8 | 546 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_180858.1 | 0 | 37 | 503 | 38 | 503 | AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002300328.1 | 0 | 12 | 521 | 7 | 515 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002321149.1 | 0 | 1 | 521 | 1 | 525 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002529469.1 | 0 | 31 | 521 | 21 | 509 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 36 | 504 | 2 | 428 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1ksc_A | 0 | 36 | 504 | 2 | 428 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1ks8_A | 0 | 36 | 504 | 2 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 32 | 505 | 19 | 460 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 36 | 518 | 3 | 449 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |