Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G092400.2 |
Family | GH9 |
Protein Properties | Length: 453 Molecular Weight: 51221.5 Isoelectric Point: 5.1936 |
Chromosome | Chromosome/Scaffold: 02 Start: 11724509 End: 11726528 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 9 | 432 | 0 |
QVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVLEYGDEISSAGEYTHALEAIKWGTDYFIKAHTHPNVLWVEVGDGDTDHYCWQRPEDMTTSRQAYKVDE KNPGSDVAGETAAAMAAASIVFRKTNPHYSHLLLQHAEQLFEFGDKFRGKYDESVRVVKGYYPSVSGFKDELLWAALWLYKATDKEDYLSYALEKANEFG GITWAITEFSWDVKFPALQIIASMLLTEENHREMGFKLVFEQYRSKAEYYLCACLNKNNGSNVNRTPAGLLYIRQWNNMQYVSNAAFLLTVYSDYLRASN QRLRCDRGKVGPEEVLLFARSQADYILGANPMGMSYLVGYGSRYPQRMHHRGASIESYRENKGFIGCTQGYDYWYPRNDPNPNVVVGALVGGPDHMDRFS DDRKNFMQTEACTYNTASLVGVLA |
Full Sequence |
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Protein Sequence Length: 453 Download |
MCISNLYEQV DLVGGYYDAG DNVKFGLPMA FTITMLSWGV LEYGDEISSA GEYTHALEAI 60 KWGTDYFIKA HTHPNVLWVE VGDGDTDHYC WQRPEDMTTS RQAYKVDEKN PGSDVAGETA 120 AAMAAASIVF RKTNPHYSHL LLQHAEQLFE FGDKFRGKYD ESVRVVKGYY PSVSGFKDEL 180 LWAALWLYKA TDKEDYLSYA LEKANEFGGI TWAITEFSWD VKFPALQIIA SMLLTEENHR 240 EMGFKLVFEQ YRSKAEYYLC ACLNKNNGSN VNRTPAGLLY IRQWNNMQYV SNAAFLLTVY 300 SDYLRASNQR LRCDRGKVGP EEVLLFARSQ ADYILGANPM GMSYLVGYGS RYPQRMHHRG 360 ASIESYRENK GFIGCTQGYD YWYPRNDPNP NVVVGALVGG PDHMDRFSDD RKNFMQTEAC 420 TYNTASLVGV LAKLHGVEEE DGYLNTPLLA SS* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN00119 | PLN00119 | 2.0e-175 | 10 | 434 | 428 | + endoglucanase |
pfam00759 | Glyco_hydro_9 | 1.0e-177 | 7 | 432 | 428 | + Glycosyl hydrolase family 9. |
PLN02420 | PLN02420 | 0 | 6 | 451 | 448 | + endoglucanase |
PLN02171 | PLN02171 | 0 | 10 | 436 | 427 | + endoglucanase |
PLN02340 | PLN02340 | 0 | 10 | 443 | 434 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81074.1 | 0 | 6 | 451 | 66 | 546 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_180858.1 | 0 | 6 | 433 | 77 | 503 | AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002321149.1 | 0 | 6 | 451 | 80 | 525 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002525326.1 | 0 | 6 | 451 | 83 | 526 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
RefSeq | XP_002529469.1 | 0 | 6 | 451 | 66 | 509 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 11 | 434 | 47 | 428 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ksc_A | 0 | 11 | 434 | 47 | 428 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ks8_A | 0 | 11 | 434 | 47 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 10 | 435 | 68 | 460 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 10 | 448 | 47 | 449 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY276095 | 310 | 14 | 323 | 0 |
DY287831 | 300 | 6 | 305 | 0 |
FC898934 | 300 | 14 | 313 | 0 |
DY274365 | 333 | 6 | 335 | 0 |
CF651941 | 300 | 127 | 425 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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