y
Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.002G137600.1 |
Family | GT43 |
Protein Properties | Length: 386 Molecular Weight: 44026.5 Isoelectric Point: 9.6834 |
Chromosome | Chromosome/Scaffold: 02 Start: 23224559 End: 23227582 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT43 | 153 | 361 | 0 |
LGQVLRLVKPPLVWIVVEEKTVSLETAQILRKTGVMYRHVVSTRNSSDVKDRGVHQRNAALEHIERHKLDGIVFFADDDNVYTLELFESLRTTSRFGTWP VAMLEQSKNKAIVEGPVCNASRVIGWHTNEKSKRLRRFHVDMSGFAFSSTILWDPKRWGRPFSNPIRQLDTVKEGFQETTFIEQVVEDESQMEGIPPGCS KVMNWHLHL |
Full Sequence |
---|
Protein Sequence Length: 386 Download |
MPSIRRTLSP AFHGRSTQNG AAGFSSSPSN KLLHKHFPSS ASSTLLNLVY RRGWRRSFCR 60 CLFFFLIGLL FGITPFGQMD TDIRPKDFAS PDLRPPHVHL QSDDPIFSYV ALGVNTQLEQ 120 HNEVTDSIEP LKQLIVVTPT YNRGFQVYFL NRLGQVLRLV KPPLVWIVVE EKTVSLETAQ 180 ILRKTGVMYR HVVSTRNSSD VKDRGVHQRN AALEHIERHK LDGIVFFADD DNVYTLELFE 240 SLRTTSRFGT WPVAMLEQSK NKAIVEGPVC NASRVIGWHT NEKSKRLRRF HVDMSGFAFS 300 STILWDPKRW GRPFSNPIRQ LDTVKEGFQE TTFIEQVVED ESQMEGIPPG CSKVMNWHLH 360 LDTGNVVYPK GWLLEKNLEV ILPIK* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 1.0e-76 | 153 | 363 | 221 | + Glycosyltransferase family 43. | ||
PLN02458 | PLN02458 | 4.0e-78 | 117 | 364 | 255 | + transferase, transferring glycosyl groups | ||
cd00218 | GlcAT-I | 5.0e-101 | 134 | 363 | 238 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI93172.1 | 0 | 1 | 385 | 1 | 394 | beta-1,3-glucuronosyltransferase [Gossypium raimondii] |
EMBL | CBI19320.1 | 0 | 1 | 385 | 1 | 381 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283625.1 | 0 | 1 | 385 | 1 | 405 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301102.1 | 0 | 1 | 385 | 1 | 395 | glycosyl transferase [Populus trichocarpa] |
RefSeq | XP_002510001.1 | 0 | 1 | 385 | 1 | 405 | beta-1,3-glucuronyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2d0j_D | 8e-29 | 131 | 367 | 2 | 232 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_C | 8e-29 | 131 | 367 | 2 | 232 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_B | 8e-29 | 131 | 367 | 2 | 232 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_A | 8e-29 | 131 | 367 | 2 | 232 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 1v84_B | 4e-28 | 131 | 358 | 2 | 230 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |