| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.002G172000.6 |
| Family | CE11 |
| Protein Properties | Length: 204 Molecular Weight: 22550.8 Isoelectric Point: 6.6561 |
| Chromosome | Chromosome/Scaffold: 02 Start: 43609000 End: 43610384 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE11 | 25 | 192 | 0 |
| QQTLAGCIELSGKTLHSGKVSKVKIWPVFAGEGRYFEFHSNLIPASIDFVRESLLCTTLCKDGYKIRTVEHLLSALEAKGIDNCRIQIQSLDSEDTEVEV PIFDGSANAWVEAIEQVGRKEALDRCGNNVEKLAPHLSEPFYVSRNDSFMVAFPASKVHISCGIDFPK | |||
| Full Sequence |
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| Protein Sequence Length: 204 Download |
| MRLSAAINSF KSSNLISWKT TGKLQQTLAG CIELSGKTLH SGKVSKVKIW PVFAGEGRYF 60 EFHSNLIPAS IDFVRESLLC TTLCKDGYKI RTVEHLLSAL EAKGIDNCRI QIQSLDSEDT 120 EVEVPIFDGS ANAWVEAIEQ VGRKEALDRC GNNVEKLAPH LSEPFYVSRN DSFMVAFPAS 180 KVHISCGIDF PKVNSFVLWY ADC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 4.0e-28 | 25 | 191 | 175 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 7.0e-32 | 25 | 191 | 172 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| COG0774 | LpxC | 8.0e-38 | 24 | 191 | 174 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| pfam03331 | LpxC | 6.0e-40 | 25 | 191 | 172 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| PRK13186 | lpxC | 8.0e-48 | 25 | 191 | 171 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26831.1 | 0 | 1 | 193 | 1 | 193 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001117351.1 | 0 | 1 | 193 | 1 | 207 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | NP_173874.2 | 0 | 1 | 193 | 1 | 207 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | NP_173884.5 | 0 | 1 | 193 | 44 | 250 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | XP_002281269.1 | 0 | 1 | 193 | 1 | 193 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3uhm_A | 0.000000000000009 | 25 | 190 | 4 | 160 | A Chain A, Structure Of Lpxc From Aquifex Aeolicus In Complex With Udp |
| PDB | 3u1y_B | 0.000000000000009 | 25 | 190 | 4 | 160 | A Chain A, Structure Of Lpxc From Aquifex Aeolicus In Complex With Udp |
| PDB | 3u1y_A | 0.000000000000009 | 25 | 190 | 4 | 160 | A Chain A, Structure Of Lpxc From Aquifex Aeolicus In Complex With Udp |
| PDB | 3p3e_A | 0.000000000000009 | 25 | 190 | 4 | 160 | A Chain A, Structure Of Lpxc From Aquifex Aeolicus In Complex With Udp |
| PDB | 2ves_C | 0.000000000000009 | 25 | 190 | 4 | 160 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| BE053971 | 193 | 1 | 193 | 0 |
| BQ405531 | 187 | 7 | 193 | 0 |
| CU585894 | 191 | 3 | 193 | 0 |
| FY924070 | 191 | 1 | 191 | 0 |
| FS953165 | 193 | 1 | 193 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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