Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.002G175700.1 |
Family | GH9 |
Protein Properties | Length: 496 Molecular Weight: 54249.9 Isoelectric Point: 9.3005 |
Chromosome | Chromosome/Scaffold: 02 Start: 44815378 End: 44819695 |
Description | glycosyl hydrolase 9B1 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH9 | 34 | 489 | 0 |
DYHDALRKSILFFEGQRSGKLPPDQRVKWRRDSALRDGSTAGVDLTGGYYDAGDNVKFGFPMAFTTTLLAWSIIDFGRNMGPELKNAVKAVKWSTDYLLK ATAKPGVVYVQVGDAYSDHSCWERPEDMDTLRTVYKIDNAHPGSDVAGETAAALAAASIVFRSRDPAYSRLLLNRAVRVFNFADKHRGAYSSSLHAAVCP FYCDVNGYQDELLWAAAWLHKASRKRAYREYIVKNEVVLRAGDTINEFGWDNKHAGINVLISKEVLMGRADYFESFKQNADGFICSILPGITHPQVQYSP GGLIFKAGGSNMQHVTSLSFLLLAYSNYLSHANKAVPCGERSASPALLKQLAKRQVNYILGDNPLGMSYMVGYGSRFPQRIHHRGSSLPSVAAHPARIGC KAGSRYYLSPSPNPNLLLGAVVGGPNVSDAFPDSRPYFQESEPTTYINAPLVGLLA |
Full Sequence |
---|
Protein Sequence Length: 496 Download |
MAPKSFSFPG IFPALLASSL ALLLLPTPII AVHDYHDALR KSILFFEGQR SGKLPPDQRV 60 KWRRDSALRD GSTAGVDLTG GYYDAGDNVK FGFPMAFTTT LLAWSIIDFG RNMGPELKNA 120 VKAVKWSTDY LLKATAKPGV VYVQVGDAYS DHSCWERPED MDTLRTVYKI DNAHPGSDVA 180 GETAAALAAA SIVFRSRDPA YSRLLLNRAV RVFNFADKHR GAYSSSLHAA VCPFYCDVNG 240 YQDELLWAAA WLHKASRKRA YREYIVKNEV VLRAGDTINE FGWDNKHAGI NVLISKEVLM 300 GRADYFESFK QNADGFICSI LPGITHPQVQ YSPGGLIFKA GGSNMQHVTS LSFLLLAYSN 360 YLSHANKAVP CGERSASPAL LKQLAKRQVN YILGDNPLGM SYMVGYGSRF PQRIHHRGSS 420 LPSVAAHPAR IGCKAGSRYY LSPSPNPNLL LGAVVGGPNV SDAFPDSRPY FQESEPTTYI 480 NAPLVGLLAF FSAHP* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02308 | PLN02308 | 0 | 1 | 495 | 495 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 26 | 494 | 469 | + endoglucanase | ||
PLN03009 | PLN03009 | 0 | 26 | 495 | 473 | + cellulase | ||
pfam00759 | Glyco_hydro_9 | 0 | 34 | 489 | 462 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 0 | 34 | 489 | 460 | + endoglucanase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ15175.1 | 0 | 1 | 494 | 1 | 495 | AF357588_1 endo-1,4-beta-glucanase isoform 02 [Fragaria x ananassa] |
GenBank | ABK92482.1 | 0 | 20 | 495 | 21 | 496 | unknown [Populus trichocarpa] |
RefSeq | XP_002311518.1 | 0 | 20 | 495 | 21 | 496 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315868.1 | 0 | 33 | 494 | 17 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527779.1 | 0 | 1 | 494 | 1 | 491 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 32 | 489 | 2 | 426 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1ksc_A | 0 | 32 | 489 | 2 | 426 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1ks8_A | 0 | 32 | 489 | 2 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 34 | 491 | 5 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 34 | 491 | 5 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |