| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.002G197200.3 |
| Family | GH35 |
| Protein Properties | Length: 717 Molecular Weight: 80172.7 Isoelectric Point: 9.3634 |
| Chromosome | Chromosome/Scaffold: 02 Start: 53387065 End: 53391063 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 22 | 233 | 0 |
| GLPYWLREVPGIIFRSDNEPFKKHMKRFVTMIVDKLKQEKLFAPQGGPIILAQIENEYNTIQRAFREKGDSYVQWAGKLALSLNANVPWIMCKQRDAPDP VINTCNGRHCGDTFYGPNKRNKPALWTENWTAQYRVFGDPPSQRSAEDLAYSVARFFSKNGSMVNYYMYYGGTNFGRTSASFTTTRYYDEAPLDEFGLQR EPKWGHLKDVHR | |||
| Full Sequence |
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| Protein Sequence Length: 717 Download |
| MSISCMQSLG LAPLSRLNGI TGLPYWLREV PGIIFRSDNE PFKKHMKRFV TMIVDKLKQE 60 KLFAPQGGPI ILAQIENEYN TIQRAFREKG DSYVQWAGKL ALSLNANVPW IMCKQRDAPD 120 PVINTCNGRH CGDTFYGPNK RNKPALWTEN WTAQYRVFGD PPSQRSAEDL AYSVARFFSK 180 NGSMVNYYMY YGGTNFGRTS ASFTTTRYYD EAPLDEFGLQ REPKWGHLKD VHRALSLCKR 240 ALFWGVPTTL KLGPDQQAIV WQQPGTSACA AFLANNNTRL AQHVNFRGQD ICLPARSISV 300 LPDCKTVVFN TQLVTTQHNS RNFVRSEIAN KNFNWEMYRE VPPVGLGFKF DVPRELFHLT 360 KDTTDYAWYT TSLKLGRRDL PMKKNVSPVL RVASLGHGIH AYVNGEYAGS AHGSKVEKSF 420 VFQRAVSLKE GENHIALLGY LVGLPDSGAY MEKRFAGPRS ITILGLNTGT LDISQNGWGH 480 QVGIDGEKKK LFTEEGSKSV QWTKPDQGGP LTWYKGYFDA PEGDNPVAIV MTGMGKGMVW 540 INGRSIGRYW NNYLSPLKKP TQSEYHIPRA YLKPKNLIVL LEEEEGNPKD VHIVTVNRDT 600 ICSAVSEIHP PSPRLFETKN GTLQPKVNDL KPRAELICPG KKQIVAVEFA SYGDPFGACG 660 AYFIGNCTAP ESKQVVEKYC LGKPSCQIPL DSIHFSDQNG ACTHLRKTLA VQVKCA* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 2.0e-17 | 636 | 715 | 83 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-85 | 22 | 235 | 228 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 22 | 716 | 728 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS76480.1 | 0 | 22 | 716 | 149 | 843 | beta-galactosidase [Gossypium hirsutum] |
| GenBank | ACC60982.1 | 0 | 22 | 716 | 128 | 827 | beta-galactosidase 2 precursor [Petunia x hybrida] |
| RefSeq | XP_002278545.1 | 0 | 22 | 716 | 132 | 830 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306183.1 | 0 | 22 | 716 | 131 | 827 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312963.1 | 0 | 22 | 716 | 131 | 826 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0.00000000002 | 22 | 218 | 111 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.00007 | 477 | 613 | 503 | 633 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 0.00000000002 | 22 | 218 | 111 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 0.00007 | 477 | 613 | 503 | 633 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 0.00000000002 | 22 | 218 | 111 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CO126401 | 292 | 80 | 371 | 0 |
| CO131201 | 292 | 337 | 628 | 0 |
| ES817778 | 322 | 377 | 698 | 0 |
| DT557450 | 280 | 104 | 383 | 0 |
| ES817778 | 49 | 666 | 714 | 0.00004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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