Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G219100.1 |
Family | GH3 |
Protein Properties | Length: 770 Molecular Weight: 84481.3 Isoelectric Point: 7.6217 |
Chromosome | Chromosome/Scaffold: 02 Start: 57249521 End: 57253869 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 72 | 325 | 0 |
AIPRLGIPAYEWWSEALHGVSNVGPGIKFDGTIKAATSFPQVILAAASFDAYQWYRIGQAIGREARAIYNAGEAKGLTFWAPNINIFRDPRWGRGQETPG EDPLVAGKYAASYIRGIQGDTFEGGKLGQHLQASACCKHFTAYDLDNWKGMNRFVFDARVTVQDLADTYQPPFEKCVREGGGSCMMCAYNRVNGVPSCAD PNLLSKTVRGEWDFKGYIASDCDAVAIIYDAQGYAKSPQDAVADVLRAGMDVNC |
Full Sequence |
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Protein Sequence Length: 770 Download |
MKFEQLCLVS LTLFIHVAST TTPPFSCDSS DPTTKNYPFC QSTLPVTQRA RDLVSRLTLD 60 EKISQLVNSA PAIPRLGIPA YEWWSEALHG VSNVGPGIKF DGTIKAATSF PQVILAAASF 120 DAYQWYRIGQ AIGREARAIY NAGEAKGLTF WAPNINIFRD PRWGRGQETP GEDPLVAGKY 180 AASYIRGIQG DTFEGGKLGQ HLQASACCKH FTAYDLDNWK GMNRFVFDAR VTVQDLADTY 240 QPPFEKCVRE GGGSCMMCAY NRVNGVPSCA DPNLLSKTVR GEWDFKGYIA SDCDAVAIIY 300 DAQGYAKSPQ DAVADVLRAG MDVNCGSYLQ KYTKSAILQK KLPESQVDRA LHNLFAIRMR 360 LGLFNGNPLH NPFGNIRADQ ICSPEHQILA LEAARNGIVL LKNHAKLLPL PKSAMSLAVI 420 GPNAKSPQTL VGNYAGPPCE STTPLQALQS YVKDTVYHRG CDTVSCSSIA IDEAVDIAKR 480 AHFVVLIMGL DQTQEREALD RVDLLLPGRQ QELITSVAKS AKKPVVLVLL SGGPIDVSFA 540 KDDHRIGAIL WAGYPGQGGG IALAEIIFGD HNPGGRLPGT WYPQDYTKVP MTDMRMRPDS 600 FSDYPGRTYR FYEGDKVFEF GYGLSYSKYS YKFTHVSRKN LYLNHSSSLH TTRSWDSVGY 660 KLVSEVGTQV CDENKFKVGV GVKNDGEMSG KHPVLLFARQ GKVGDGRVKK QLIGFQSVVL 720 SGGERGEIEF EVSPCEDLSR ANEYGVMVMD EGRHFLVVGD DKLPVTIII* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 1.0e-57 | 68 | 427 | 368 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 8.0e-63 | 398 | 624 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 6.0e-68 | 58 | 350 | 323 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 8.0e-78 | 6 | 738 | 821 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 6 | 767 | 774 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_177929.1 | 0 | 13 | 769 | 12 | 767 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002285805.1 | 0 | 1 | 769 | 1 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302285.1 | 0 | 1 | 769 | 1 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 1 | 769 | 1 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 13 | 769 | 17 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 108 | 742 | 91 | 705 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
PDB | 3u48_A | 0 | 108 | 742 | 91 | 705 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
PDB | 3u4a_B | 0 | 108 | 742 | 91 | 705 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
PDB | 3u4a_A | 0 | 108 | 742 | 91 | 705 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
PDB | 4i3g_B | 8.99634e-43 | 47 | 450 | 51 | 428 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |